Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-6A0A075B640 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-6A0A075B640 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav7-6A0A075B640 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-6A0A075B640 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-6A0A075B640 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav7-6A0A075B640 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-6A0A075B640 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-6A0A075B640 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-6A0A075B640 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-6A0A075B640 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav7-6A0A075B640 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-6A0A075B640 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav7-6A0A075B640 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-6A0A075B640 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-6A0A075B640 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-6A0A075B640 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav7-6A0A075B640 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-6A0A075B640 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-6A0A075B640 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-6A0A075B640 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.49■□□□□ 0.07
Trav7-6A0A075B640 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav7-6A0A075B640 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-6A0A075B640 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 Gm37136-201ENSMUST00000194368 194 ntBASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav7-6A0A075B640 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav7-6A0A075B640 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav7-6A0A075B640 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav7-6A0A075B640 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-6A0A075B640 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-6A0A075B640 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-6A0A075B640 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav7-6A0A075B640 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-6A0A075B640 Gm6821-201ENSMUST00000107540 542 ntBASIC15.46■□□□□ 0.07
Trav7-6A0A075B640 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav7-6A0A075B640 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav7-6A0A075B640 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-6A0A075B640 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-6A0A075B640 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.45■□□□□ 0.06
Trav7-6A0A075B640 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav7-6A0A075B640 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-6A0A075B640 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-6A0A075B640 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-6A0A075B640 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-6A0A075B640 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-6A0A075B640 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-6A0A075B640 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-6A0A075B640 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav7-6A0A075B640 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-6A0A075B640 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-6A0A075B640 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav7-6A0A075B640 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-6A0A075B640 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-6A0A075B640 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-6A0A075B640 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-6A0A075B640 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-6A0A075B640 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Trav7-6A0A075B640 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-6A0A075B640 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Trav7-6A0A075B640 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav7-6A0A075B640 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-6A0A075B640 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav7-6A0A075B640 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-6A0A075B640 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms