Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12n-2A0A075B626 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav12n-2A0A075B626 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trav12n-2A0A075B626 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav12n-2A0A075B626 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.08■□□□□ 0.8
Trav12n-2A0A075B626 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trav12n-2A0A075B626 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav12n-2A0A075B626 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.07■□□□□ 0.8
Trav12n-2A0A075B626 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.07■□□□□ 0.8
Trav12n-2A0A075B626 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav12n-2A0A075B626 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Gm14523-201ENSMUST00000117260 558 ntBASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Gm12366-201ENSMUST00000121722 873 ntBASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Gm5786-201ENSMUST00000085368 882 ntBASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trav12n-2A0A075B626 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12n-2A0A075B626 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12n-2A0A075B626 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12n-2A0A075B626 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.05■□□□□ 0.8
Trav12n-2A0A075B626 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12n-2A0A075B626 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12n-2A0A075B626 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trav12n-2A0A075B626 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trav12n-2A0A075B626 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav12n-2A0A075B626 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trav12n-2A0A075B626 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav12n-2A0A075B626 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav12n-2A0A075B626 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav12n-2A0A075B626 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12n-2A0A075B626 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav12n-2A0A075B626 Gm7332-201ENSMUST00000118351 454 ntBASIC20.02■□□□□ 0.8
Trav12n-2A0A075B626 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.02■□□□□ 0.8
Trav12n-2A0A075B626 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav12n-2A0A075B626 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Trav12n-2A0A075B626 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav12n-2A0A075B626 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Trav12n-2A0A075B626 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.01■□□□□ 0.79
Trav12n-2A0A075B626 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.01■□□□□ 0.79
Trav12n-2A0A075B626 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.01■□□□□ 0.79
Trav12n-2A0A075B626 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav12n-2A0A075B626 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav12n-2A0A075B626 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav12n-2A0A075B626 Cap2-205ENSMUST00000225824 1634 ntBASIC20■□□□□ 0.79
Trav12n-2A0A075B626 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav12n-2A0A075B626 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav12n-2A0A075B626 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav12n-2A0A075B626 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.99■□□□□ 0.79
Trav12n-2A0A075B626 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.99■□□□□ 0.79
Trav12n-2A0A075B626 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav12n-2A0A075B626 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trav12n-2A0A075B626 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Trav12n-2A0A075B626 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.98■□□□□ 0.79
Trav12n-2A0A075B626 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trav12n-2A0A075B626 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav12n-2A0A075B626 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.98■□□□□ 0.79
Trav12n-2A0A075B626 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav12n-2A0A075B626 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav12n-2A0A075B626 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav12n-2A0A075B626 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav12n-2A0A075B626 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.97■□□□□ 0.79
Trav12n-2A0A075B626 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12n-2A0A075B626 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav12n-2A0A075B626 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trav12n-2A0A075B626 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav12n-2A0A075B626 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav12n-2A0A075B626 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav12n-2A0A075B626 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav12n-2A0A075B626 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav12n-2A0A075B626 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trav12n-2A0A075B626 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms