Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rtl1Q7M732 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Gm10461-201ENSMUST00000202073 4786 ntBASIC26.41■■□□□ 1.82
Rtl1Q7M732 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rtl1Q7M732 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtl1Q7M732 Gm14767-201ENSMUST00000121559 586 ntBASIC26.39■■□□□ 1.82
Rtl1Q7M732 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC26.39■■□□□ 1.82
Rtl1Q7M732 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtl1Q7M732 AC158529.1-201ENSMUST00000223618 239 ntBASIC26.39■■□□□ 1.82
Rtl1Q7M732 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtl1Q7M732 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtl1Q7M732 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rtl1Q7M732 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtl1Q7M732 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtl1Q7M732 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Rtl1Q7M732 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Rtl1Q7M732 Efs-202ENSMUST00000227037 2540 ntBASIC26.39■■□□□ 1.82
Rtl1Q7M732 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Trav13-3-201ENSMUST00000117226 336 ntBASIC26.39■■□□□ 1.81
Rtl1Q7M732 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rtl1Q7M732 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rtl1Q7M732 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC26.38■■□□□ 1.81
Rtl1Q7M732 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtl1Q7M732 AC159621.2-201ENSMUST00000223519 1326 ntBASIC26.38■■□□□ 1.81
Rtl1Q7M732 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Gm18766-201ENSMUST00000189811 808 ntBASIC26.38■■□□□ 1.81
Rtl1Q7M732 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Rtl1Q7M732 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtl1Q7M732 Gm13453-201ENSMUST00000118708 357 ntBASIC26.36■■□□□ 1.81
Rtl1Q7M732 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Gm5626-201ENSMUST00000222151 1058 ntBASIC26.36■■□□□ 1.81
Rtl1Q7M732 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC26.36■■□□□ 1.81
Rtl1Q7M732 Gm12151-201ENSMUST00000121374 290 ntBASIC26.36■■□□□ 1.81
Rtl1Q7M732 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms