Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rbfox1Q9JJ43 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Rbfox1Q9JJ43 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rbfox1Q9JJ43 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rbfox1Q9JJ43 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.09■□□□□ 0.65
Rbfox1Q9JJ43 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rbfox1Q9JJ43 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rbfox1Q9JJ43 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Rbfox1Q9JJ43 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Rbfox1Q9JJ43 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rbfox1Q9JJ43 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rbfox1Q9JJ43 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rbfox1Q9JJ43 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.08■□□□□ 0.64
Rbfox1Q9JJ43 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rbfox1Q9JJ43 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rbfox1Q9JJ43 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbfox1Q9JJ43 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rbfox1Q9JJ43 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbfox1Q9JJ43 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbfox1Q9JJ43 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rbfox1Q9JJ43 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rbfox1Q9JJ43 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbfox1Q9JJ43 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rbfox1Q9JJ43 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rbfox1Q9JJ43 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rbfox1Q9JJ43 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rbfox1Q9JJ43 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbfox1Q9JJ43 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Rbfox1Q9JJ43 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rbfox1Q9JJ43 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.05■□□□□ 0.64
Rbfox1Q9JJ43 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbfox1Q9JJ43 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbfox1Q9JJ43 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbfox1Q9JJ43 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox1Q9JJ43 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox1Q9JJ43 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox1Q9JJ43 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.04■□□□□ 0.64
Rbfox1Q9JJ43 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Rbfox1Q9JJ43 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rbfox1Q9JJ43 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox1Q9JJ43 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox1Q9JJ43 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbfox1Q9JJ43 Gm6821-201ENSMUST00000107540 542 ntBASIC19.03■□□□□ 0.64
Rbfox1Q9JJ43 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbfox1Q9JJ43 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.03■□□□□ 0.64
Rbfox1Q9JJ43 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbfox1Q9JJ43 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rbfox1Q9JJ43 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rbfox1Q9JJ43 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.02■□□□□ 0.64
Rbfox1Q9JJ43 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.02■□□□□ 0.64
Rbfox1Q9JJ43 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Rbfox1Q9JJ43 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rbfox1Q9JJ43 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rbfox1Q9JJ43 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rbfox1Q9JJ43 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rbfox1Q9JJ43 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Rbfox1Q9JJ43 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rbfox1Q9JJ43 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rbfox1Q9JJ43 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rbfox1Q9JJ43 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rbfox1Q9JJ43 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rbfox1Q9JJ43 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rbfox1Q9JJ43 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rbfox1Q9JJ43 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Rbfox1Q9JJ43 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox1Q9JJ43 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.96■□□□□ 0.63
Rbfox1Q9JJ43 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.96■□□□□ 0.63
Rbfox1Q9JJ43 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
Rbfox1Q9JJ43 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rbfox1Q9JJ43 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms