Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msantd3Q9CR78 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msantd3Q9CR78 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msantd3Q9CR78 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msantd3Q9CR78 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msantd3Q9CR78 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.61■■□□□ 1.05
Msantd3Q9CR78 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Msantd3Q9CR78 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.61■■□□□ 1.05
Msantd3Q9CR78 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msantd3Q9CR78 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Msantd3Q9CR78 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msantd3Q9CR78 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.6■■□□□ 1.05
Msantd3Q9CR78 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.6■■□□□ 1.05
Msantd3Q9CR78 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.6■■□□□ 1.05
Msantd3Q9CR78 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msantd3Q9CR78 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msantd3Q9CR78 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msantd3Q9CR78 Gm22567-201ENSMUST00000175542 342 ntBASIC21.59■■□□□ 1.05
Msantd3Q9CR78 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.59■■□□□ 1.05
Msantd3Q9CR78 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Msantd3Q9CR78 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Msantd3Q9CR78 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Msantd3Q9CR78 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Msantd3Q9CR78 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Msantd3Q9CR78 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Msantd3Q9CR78 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Msantd3Q9CR78 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.58■■□□□ 1.04
Msantd3Q9CR78 Gm43566-201ENSMUST00000196851 808 ntBASIC21.57■■□□□ 1.04
Msantd3Q9CR78 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.57■■□□□ 1.04
Msantd3Q9CR78 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.57■■□□□ 1.04
Msantd3Q9CR78 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Msantd3Q9CR78 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Msantd3Q9CR78 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.56■■□□□ 1.04
Msantd3Q9CR78 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Msantd3Q9CR78 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msantd3Q9CR78 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.55■■□□□ 1.04
Msantd3Q9CR78 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.55■■□□□ 1.04
Msantd3Q9CR78 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msantd3Q9CR78 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.55■■□□□ 1.04
Msantd3Q9CR78 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.55■■□□□ 1.04
Msantd3Q9CR78 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Msantd3Q9CR78 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Msantd3Q9CR78 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Msantd3Q9CR78 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Msantd3Q9CR78 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Msantd3Q9CR78 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Msantd3Q9CR78 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Msantd3Q9CR78 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Msantd3Q9CR78 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Msantd3Q9CR78 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Msantd3Q9CR78 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Msantd3Q9CR78 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.52■■□□□ 1.04
Msantd3Q9CR78 Gm45444-201ENSMUST00000211394 898 ntBASIC21.52■■□□□ 1.04
Msantd3Q9CR78 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Msantd3Q9CR78 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Msantd3Q9CR78 Amer2-203ENSMUST00000225247 2662 ntBASIC21.51■■□□□ 1.03
Msantd3Q9CR78 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.51■■□□□ 1.03
Msantd3Q9CR78 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.51■■□□□ 1.03
Msantd3Q9CR78 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Msantd3Q9CR78 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Msantd3Q9CR78 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Msantd3Q9CR78 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.5■■□□□ 1.03
Msantd3Q9CR78 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.5■■□□□ 1.03
Msantd3Q9CR78 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msantd3Q9CR78 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msantd3Q9CR78 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Msantd3Q9CR78 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msantd3Q9CR78 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msantd3Q9CR78 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msantd3Q9CR78 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msantd3Q9CR78 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.48■■□□□ 1.03
Msantd3Q9CR78 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msantd3Q9CR78 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msantd3Q9CR78 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Msantd3Q9CR78 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Msantd3Q9CR78 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.45■■□□□ 1.02
Msantd3Q9CR78 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msantd3Q9CR78 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msantd3Q9CR78 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.44■■□□□ 1.02
Msantd3Q9CR78 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.44■■□□□ 1.02
Msantd3Q9CR78 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Msantd3Q9CR78 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msantd3Q9CR78 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msantd3Q9CR78 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msantd3Q9CR78 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msantd3Q9CR78 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.43■■□□□ 1.02
Msantd3Q9CR78 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msantd3Q9CR78 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Msantd3Q9CR78 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msantd3Q9CR78 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms