Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cotl1Q9CQI6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cotl1Q9CQI6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cotl1Q9CQI6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cotl1Q9CQI6 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.44■□□□□ 0.38
Cotl1Q9CQI6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cotl1Q9CQI6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.44■□□□□ 0.38
Cotl1Q9CQI6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.43■□□□□ 0.38
Cotl1Q9CQI6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cotl1Q9CQI6 Zfp131-205ENSMUST00000223812 663 ntBASIC17.43■□□□□ 0.38
Cotl1Q9CQI6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cotl1Q9CQI6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cotl1Q9CQI6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cotl1Q9CQI6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Cotl1Q9CQI6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cotl1Q9CQI6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cotl1Q9CQI6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cotl1Q9CQI6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cotl1Q9CQI6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cotl1Q9CQI6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cotl1Q9CQI6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cotl1Q9CQI6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cotl1Q9CQI6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cotl1Q9CQI6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.41■□□□□ 0.38
Cotl1Q9CQI6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cotl1Q9CQI6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cotl1Q9CQI6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cotl1Q9CQI6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cotl1Q9CQI6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cotl1Q9CQI6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cotl1Q9CQI6 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.4■□□□□ 0.38
Cotl1Q9CQI6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cotl1Q9CQI6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.4■□□□□ 0.38
Cotl1Q9CQI6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.39■□□□□ 0.37
Cotl1Q9CQI6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cotl1Q9CQI6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cotl1Q9CQI6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cotl1Q9CQI6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.37■□□□□ 0.37
Cotl1Q9CQI6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cotl1Q9CQI6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cotl1Q9CQI6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cotl1Q9CQI6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cotl1Q9CQI6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cotl1Q9CQI6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cotl1Q9CQI6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cotl1Q9CQI6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cotl1Q9CQI6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cotl1Q9CQI6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cotl1Q9CQI6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cotl1Q9CQI6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cotl1Q9CQI6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cotl1Q9CQI6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Cotl1Q9CQI6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cotl1Q9CQI6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cotl1Q9CQI6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.35■□□□□ 0.37
Cotl1Q9CQI6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cotl1Q9CQI6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cotl1Q9CQI6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cotl1Q9CQI6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cotl1Q9CQI6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cotl1Q9CQI6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cotl1Q9CQI6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cotl1Q9CQI6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cotl1Q9CQI6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cotl1Q9CQI6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cotl1Q9CQI6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cotl1Q9CQI6 Iqck-206ENSMUST00000208658 2891 ntBASIC17.33■□□□□ 0.36
Cotl1Q9CQI6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.33■□□□□ 0.36
Cotl1Q9CQI6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.33■□□□□ 0.36
Cotl1Q9CQI6 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.33■□□□□ 0.36
Cotl1Q9CQI6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cotl1Q9CQI6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.33■□□□□ 0.36
Cotl1Q9CQI6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.32■□□□□ 0.36
Cotl1Q9CQI6 Gm9397-201ENSMUST00000200125 605 ntBASIC17.32■□□□□ 0.36
Cotl1Q9CQI6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cotl1Q9CQI6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cotl1Q9CQI6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cotl1Q9CQI6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cotl1Q9CQI6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cotl1Q9CQI6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cotl1Q9CQI6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Cotl1Q9CQI6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.31■□□□□ 0.36
Cotl1Q9CQI6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cotl1Q9CQI6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.3■□□□□ 0.36
Cotl1Q9CQI6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cotl1Q9CQI6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.3■□□□□ 0.36
Cotl1Q9CQI6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Gm24970-201ENSMUST00000175582 82 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms