Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim33Q99PP7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim33Q99PP7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.1■■□□□ 1.13
Trim33Q99PP7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.1■■□□□ 1.13
Trim33Q99PP7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.1■■□□□ 1.13
Trim33Q99PP7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim33Q99PP7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim33Q99PP7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.09■■□□□ 1.13
Trim33Q99PP7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.09■■□□□ 1.13
Trim33Q99PP7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim33Q99PP7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Trim33Q99PP7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trim33Q99PP7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.09■■□□□ 1.13
Trim33Q99PP7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim33Q99PP7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim33Q99PP7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim33Q99PP7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim33Q99PP7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim33Q99PP7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim33Q99PP7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim33Q99PP7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim33Q99PP7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim33Q99PP7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim33Q99PP7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim33Q99PP7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Trim33Q99PP7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Trim33Q99PP7 Scarna2-201ENSMUST00000157560 414 ntBASIC22.07■■□□□ 1.12
Trim33Q99PP7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim33Q99PP7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim33Q99PP7 Terc-201ENSMUST00000082862 423 ntBASIC22.06■■□□□ 1.12
Trim33Q99PP7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim33Q99PP7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Trim33Q99PP7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim33Q99PP7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim33Q99PP7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim33Q99PP7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Trim33Q99PP7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.04■■□□□ 1.12
Trim33Q99PP7 Gm11175-201ENSMUST00000116172 543 ntBASIC22.04■■□□□ 1.12
Trim33Q99PP7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim33Q99PP7 Gm9806-201ENSMUST00000051080 552 ntBASIC22.04■■□□□ 1.12
Trim33Q99PP7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim33Q99PP7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim33Q99PP7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim33Q99PP7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim33Q99PP7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim33Q99PP7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim33Q99PP7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim33Q99PP7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim33Q99PP7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim33Q99PP7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim33Q99PP7 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.02■■□□□ 1.12
Trim33Q99PP7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim33Q99PP7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trim33Q99PP7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim33Q99PP7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim33Q99PP7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim33Q99PP7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trim33Q99PP7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim33Q99PP7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22■■□□□ 1.11
Trim33Q99PP7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim33Q99PP7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim33Q99PP7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim33Q99PP7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim33Q99PP7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim33Q99PP7 Gm16437-201ENSMUST00000025669 507 ntBASIC21.99■■□□□ 1.11
Trim33Q99PP7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim33Q99PP7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim33Q99PP7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Trim33Q99PP7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Trim33Q99PP7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.98■■□□□ 1.11
Trim33Q99PP7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim33Q99PP7 Gm11687-201ENSMUST00000118911 886 ntBASIC21.97■■□□□ 1.11
Trim33Q99PP7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim33Q99PP7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim33Q99PP7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim33Q99PP7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
Trim33Q99PP7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim33Q99PP7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim33Q99PP7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim33Q99PP7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim33Q99PP7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim33Q99PP7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Trim33Q99PP7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim33Q99PP7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
Trim33Q99PP7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim33Q99PP7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim33Q99PP7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim33Q99PP7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim33Q99PP7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim33Q99PP7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim33Q99PP7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim33Q99PP7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trim33Q99PP7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim33Q99PP7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.93■■□□□ 1.1
Trim33Q99PP7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Trim33Q99PP7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim33Q99PP7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim33Q99PP7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim33Q99PP7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim33Q99PP7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms