Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdhb5Q91XZ5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Pcdhb5Q91XZ5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhb5Q91XZ5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.88■■□□□ 1.89
Pcdhb5Q91XZ5 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.88■■□□□ 1.89
Pcdhb5Q91XZ5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhb5Q91XZ5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Pcdhb5Q91XZ5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhb5Q91XZ5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdhb5Q91XZ5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdhb5Q91XZ5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb5Q91XZ5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb5Q91XZ5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.86■■□□□ 1.89
Pcdhb5Q91XZ5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Pcdhb5Q91XZ5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
Pcdhb5Q91XZ5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.85■■□□□ 1.89
Pcdhb5Q91XZ5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Pcdhb5Q91XZ5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhb5Q91XZ5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhb5Q91XZ5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhb5Q91XZ5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.84■■□□□ 1.89
Pcdhb5Q91XZ5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhb5Q91XZ5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhb5Q91XZ5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdhb5Q91XZ5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdhb5Q91XZ5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdhb5Q91XZ5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Pcdhb5Q91XZ5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Pcdhb5Q91XZ5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhb5Q91XZ5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Pcdhb5Q91XZ5 Gm15546-201ENSMUST00000122095 826 ntBASIC26.81■■□□□ 1.88
Pcdhb5Q91XZ5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdhb5Q91XZ5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdhb5Q91XZ5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
Pcdhb5Q91XZ5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
Pcdhb5Q91XZ5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdhb5Q91XZ5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Pcdhb5Q91XZ5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdhb5Q91XZ5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdhb5Q91XZ5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Pcdhb5Q91XZ5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdhb5Q91XZ5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhb5Q91XZ5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhb5Q91XZ5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.77■■□□□ 1.88
Pcdhb5Q91XZ5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Pcdhb5Q91XZ5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.88
Pcdhb5Q91XZ5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pcdhb5Q91XZ5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Pcdhb5Q91XZ5 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.76■■□□□ 1.87
Pcdhb5Q91XZ5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Pcdhb5Q91XZ5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.76■■□□□ 1.87
Pcdhb5Q91XZ5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhb5Q91XZ5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.73■■□□□ 1.87
Pcdhb5Q91XZ5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb5Q91XZ5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.73■■□□□ 1.87
Pcdhb5Q91XZ5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.73■■□□□ 1.87
Pcdhb5Q91XZ5 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.73■■□□□ 1.87
Pcdhb5Q91XZ5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb5Q91XZ5 Gm13238-201ENSMUST00000117655 780 ntBASIC26.72■■□□□ 1.87
Pcdhb5Q91XZ5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb5Q91XZ5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb5Q91XZ5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb5Q91XZ5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb5Q91XZ5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb5Q91XZ5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pcdhb5Q91XZ5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pcdhb5Q91XZ5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.7■■□□□ 1.87
Pcdhb5Q91XZ5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
Pcdhb5Q91XZ5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdhb5Q91XZ5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.69■■□□□ 1.86
Pcdhb5Q91XZ5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb5Q91XZ5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Pcdhb5Q91XZ5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.68■■□□□ 1.86
Pcdhb5Q91XZ5 Gm43566-201ENSMUST00000196851 808 ntBASIC26.68■■□□□ 1.86
Pcdhb5Q91XZ5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.68■■□□□ 1.86
Pcdhb5Q91XZ5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb5Q91XZ5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb5Q91XZ5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb5Q91XZ5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb5Q91XZ5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Pcdhb5Q91XZ5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.67■■□□□ 1.86
Pcdhb5Q91XZ5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.67■■□□□ 1.86
Pcdhb5Q91XZ5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
Pcdhb5Q91XZ5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.66■■□□□ 1.86
Pcdhb5Q91XZ5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb5Q91XZ5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb5Q91XZ5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb5Q91XZ5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Gm22567-201ENSMUST00000175542 342 ntBASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Gm45444-201ENSMUST00000211394 898 ntBASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb5Q91XZ5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdhb5Q91XZ5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdhb5Q91XZ5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms