Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.29■■□□□ 1.16
Pcdhga6Q91XY2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga6Q91XY2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.28■■□□□ 1.16
Pcdhga6Q91XY2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga6Q91XY2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhga6Q91XY2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga6Q91XY2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga6Q91XY2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Pcdhga6Q91XY2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhga6Q91XY2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.26■■□□□ 1.15
Pcdhga6Q91XY2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Pcdhga6Q91XY2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhga6Q91XY2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Pcdhga6Q91XY2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga6Q91XY2 Gm14117-201ENSMUST00000122417 843 ntBASIC22.25■■□□□ 1.15
Pcdhga6Q91XY2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.25■■□□□ 1.15
Pcdhga6Q91XY2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga6Q91XY2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.24■■□□□ 1.15
Pcdhga6Q91XY2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.24■■□□□ 1.15
Pcdhga6Q91XY2 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.24■■□□□ 1.15
Pcdhga6Q91XY2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga6Q91XY2 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.23■■□□□ 1.15
Pcdhga6Q91XY2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhga6Q91XY2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhga6Q91XY2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga6Q91XY2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhga6Q91XY2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga6Q91XY2 Gm44428-201ENSMUST00000204474 874 ntBASIC22.21■■□□□ 1.15
Pcdhga6Q91XY2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga6Q91XY2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhga6Q91XY2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pcdhga6Q91XY2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga6Q91XY2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga6Q91XY2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga6Q91XY2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga6Q91XY2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga6Q91XY2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Pcdhga6Q91XY2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga6Q91XY2 Gm45444-201ENSMUST00000211394 898 ntBASIC22.19■■□□□ 1.14
Pcdhga6Q91XY2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga6Q91XY2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga6Q91XY2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga6Q91XY2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga6Q91XY2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga6Q91XY2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhga6Q91XY2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga6Q91XY2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga6Q91XY2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Pcdhga6Q91XY2 Gm13238-201ENSMUST00000117655 780 ntBASIC22.17■■□□□ 1.14
Pcdhga6Q91XY2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga6Q91XY2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.17■■□□□ 1.14
Pcdhga6Q91XY2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhga6Q91XY2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdhga6Q91XY2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Pcdhga6Q91XY2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhga6Q91XY2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhga6Q91XY2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga6Q91XY2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga6Q91XY2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga6Q91XY2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga6Q91XY2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhga6Q91XY2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Pcdhga6Q91XY2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhga6Q91XY2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Pcdhga6Q91XY2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga6Q91XY2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.13■■□□□ 1.13
Pcdhga6Q91XY2 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.13■■□□□ 1.13
Pcdhga6Q91XY2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga6Q91XY2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga6Q91XY2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhga6Q91XY2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhga6Q91XY2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhga6Q91XY2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 Gm9959-201ENSMUST00000068277 390 ntBASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga6Q91XY2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga6Q91XY2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdhga6Q91XY2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga6Q91XY2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Pcdhga6Q91XY2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga6Q91XY2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Pcdhga6Q91XY2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga6Q91XY2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga6Q91XY2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.09■■□□□ 1.13
Pcdhga6Q91XY2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga6Q91XY2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga6Q91XY2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhga6Q91XY2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga6Q91XY2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Pcdhga6Q91XY2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhga6Q91XY2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhga6Q91XY2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.08■■□□□ 1.12
Pcdhga6Q91XY2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdhga6Q91XY2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms