Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab40bQ8VHP8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab40bQ8VHP8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab40bQ8VHP8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.29■□□□□ 0.84
Rab40bQ8VHP8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab40bQ8VHP8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab40bQ8VHP8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab40bQ8VHP8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rab40bQ8VHP8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab40bQ8VHP8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab40bQ8VHP8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab40bQ8VHP8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab40bQ8VHP8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab40bQ8VHP8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rab40bQ8VHP8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab40bQ8VHP8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab40bQ8VHP8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rab40bQ8VHP8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rab40bQ8VHP8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.24■□□□□ 0.83
Rab40bQ8VHP8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab40bQ8VHP8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.24■□□□□ 0.83
Rab40bQ8VHP8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab40bQ8VHP8 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.23■□□□□ 0.83
Rab40bQ8VHP8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab40bQ8VHP8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab40bQ8VHP8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab40bQ8VHP8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab40bQ8VHP8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab40bQ8VHP8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rab40bQ8VHP8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.21■□□□□ 0.83
Rab40bQ8VHP8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.21■□□□□ 0.83
Rab40bQ8VHP8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rab40bQ8VHP8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab40bQ8VHP8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rab40bQ8VHP8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab40bQ8VHP8 Gm45855-201ENSMUST00000212546 880 ntBASIC20.2■□□□□ 0.82
Rab40bQ8VHP8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rab40bQ8VHP8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab40bQ8VHP8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab40bQ8VHP8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab40bQ8VHP8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab40bQ8VHP8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab40bQ8VHP8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab40bQ8VHP8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab40bQ8VHP8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab40bQ8VHP8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rab40bQ8VHP8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.17■□□□□ 0.82
Rab40bQ8VHP8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rab40bQ8VHP8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rab40bQ8VHP8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab40bQ8VHP8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab40bQ8VHP8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Rab40bQ8VHP8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab40bQ8VHP8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab40bQ8VHP8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rab40bQ8VHP8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab40bQ8VHP8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rab40bQ8VHP8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab40bQ8VHP8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Rab40bQ8VHP8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab40bQ8VHP8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.15■□□□□ 0.82
Rab40bQ8VHP8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.15■□□□□ 0.82
Rab40bQ8VHP8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rab40bQ8VHP8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.15■□□□□ 0.82
Rab40bQ8VHP8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab40bQ8VHP8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Rab40bQ8VHP8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.14■□□□□ 0.81
Rab40bQ8VHP8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.13■□□□□ 0.81
Rab40bQ8VHP8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab40bQ8VHP8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab40bQ8VHP8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab40bQ8VHP8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rab40bQ8VHP8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab40bQ8VHP8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.13■□□□□ 0.81
Rab40bQ8VHP8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab40bQ8VHP8 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.12■□□□□ 0.81
Rab40bQ8VHP8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Rab40bQ8VHP8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.12■□□□□ 0.81
Rab40bQ8VHP8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.12■□□□□ 0.81
Rab40bQ8VHP8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab40bQ8VHP8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab40bQ8VHP8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab40bQ8VHP8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab40bQ8VHP8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab40bQ8VHP8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab40bQ8VHP8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab40bQ8VHP8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Rab40bQ8VHP8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.1■□□□□ 0.81
Rab40bQ8VHP8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rab40bQ8VHP8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab40bQ8VHP8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab40bQ8VHP8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rab40bQ8VHP8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab40bQ8VHP8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.09■□□□□ 0.81
Rab40bQ8VHP8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab40bQ8VHP8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab40bQ8VHP8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab40bQ8VHP8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.08■□□□□ 0.8
Rab40bQ8VHP8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab40bQ8VHP8 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms