Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd2Q8R3K3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.46■■□□□ 1.51
Ptcd2Q8R3K3 Gm21956-201ENSMUST00000179946 522 ntBASIC24.46■■□□□ 1.51
Ptcd2Q8R3K3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.46■■□□□ 1.51
Ptcd2Q8R3K3 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.46■■□□□ 1.51
Ptcd2Q8R3K3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd2Q8R3K3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd2Q8R3K3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ptcd2Q8R3K3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Ptcd2Q8R3K3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ptcd2Q8R3K3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd2Q8R3K3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd2Q8R3K3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd2Q8R3K3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ptcd2Q8R3K3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd2Q8R3K3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd2Q8R3K3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd2Q8R3K3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd2Q8R3K3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd2Q8R3K3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Ptcd2Q8R3K3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd2Q8R3K3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.41■■□□□ 1.5
Ptcd2Q8R3K3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd2Q8R3K3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Ptcd2Q8R3K3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd2Q8R3K3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptcd2Q8R3K3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ptcd2Q8R3K3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Ptcd2Q8R3K3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptcd2Q8R3K3 Gm7417-201ENSMUST00000192950 473 ntBASIC24.39■■□□□ 1.49
Ptcd2Q8R3K3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Ptcd2Q8R3K3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.39■■□□□ 1.49
Ptcd2Q8R3K3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ptcd2Q8R3K3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ptcd2Q8R3K3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd2Q8R3K3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.38■■□□□ 1.49
Ptcd2Q8R3K3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.38■■□□□ 1.49
Ptcd2Q8R3K3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd2Q8R3K3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.37■■□□□ 1.49
Ptcd2Q8R3K3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptcd2Q8R3K3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd2Q8R3K3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.36■■□□□ 1.49
Ptcd2Q8R3K3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd2Q8R3K3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd2Q8R3K3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd2Q8R3K3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.36■■□□□ 1.49
Ptcd2Q8R3K3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.36■■□□□ 1.49
Ptcd2Q8R3K3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd2Q8R3K3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd2Q8R3K3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd2Q8R3K3 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.35■■□□□ 1.49
Ptcd2Q8R3K3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd2Q8R3K3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ptcd2Q8R3K3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ptcd2Q8R3K3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.32■■□□□ 1.48
Ptcd2Q8R3K3 Gm8495-201ENSMUST00000188740 694 ntBASIC24.32■■□□□ 1.48
Ptcd2Q8R3K3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Ptcd2Q8R3K3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ptcd2Q8R3K3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ptcd2Q8R3K3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptcd2Q8R3K3 Gm12821-201ENSMUST00000120022 600 ntBASIC24.3■■□□□ 1.48
Ptcd2Q8R3K3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptcd2Q8R3K3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.3■■□□□ 1.48
Ptcd2Q8R3K3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Ptcd2Q8R3K3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
Ptcd2Q8R3K3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ptcd2Q8R3K3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ptcd2Q8R3K3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ptcd2Q8R3K3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptcd2Q8R3K3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Ptcd2Q8R3K3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.27■■□□□ 1.48
Ptcd2Q8R3K3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ptcd2Q8R3K3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptcd2Q8R3K3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd2Q8R3K3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd2Q8R3K3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.25■■□□□ 1.47
Ptcd2Q8R3K3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptcd2Q8R3K3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptcd2Q8R3K3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.25■■□□□ 1.47
Ptcd2Q8R3K3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ptcd2Q8R3K3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ptcd2Q8R3K3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd2Q8R3K3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Ptcd2Q8R3K3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ptcd2Q8R3K3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd2Q8R3K3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd2Q8R3K3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd2Q8R3K3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd2Q8R3K3 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.2■■□□□ 1.47
Ptcd2Q8R3K3 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.2■■□□□ 1.47
Ptcd2Q8R3K3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptcd2Q8R3K3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms