Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc3Q8R323 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc3Q8R323 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc3Q8R323 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc3Q8R323 Gm7332-201ENSMUST00000118351 454 ntBASIC20.64■□□□□ 0.89
Rfc3Q8R323 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.64■□□□□ 0.89
Rfc3Q8R323 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc3Q8R323 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Terc-201ENSMUST00000082862 423 ntBASIC20.63■□□□□ 0.89
Rfc3Q8R323 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.61■□□□□ 0.89
Rfc3Q8R323 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc3Q8R323 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.61■□□□□ 0.89
Rfc3Q8R323 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc3Q8R323 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc3Q8R323 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.6■□□□□ 0.89
Rfc3Q8R323 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.6■□□□□ 0.89
Rfc3Q8R323 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc3Q8R323 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.6■□□□□ 0.89
Rfc3Q8R323 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Gm14523-201ENSMUST00000117260 558 ntBASIC20.59■□□□□ 0.89
Rfc3Q8R323 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.59■□□□□ 0.89
Rfc3Q8R323 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rfc3Q8R323 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc3Q8R323 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.58■□□□□ 0.89
Rfc3Q8R323 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Rfc3Q8R323 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rfc3Q8R323 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc3Q8R323 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.56■□□□□ 0.88
Rfc3Q8R323 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc3Q8R323 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.56■□□□□ 0.88
Rfc3Q8R323 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.55■□□□□ 0.88
Rfc3Q8R323 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
Rfc3Q8R323 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc3Q8R323 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.54■□□□□ 0.88
Rfc3Q8R323 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc3Q8R323 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc3Q8R323 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc3Q8R323 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc3Q8R323 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc3Q8R323 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc3Q8R323 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc3Q8R323 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc3Q8R323 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc3Q8R323 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Rfc3Q8R323 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfc3Q8R323 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.49■□□□□ 0.87
Rfc3Q8R323 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc3Q8R323 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc3Q8R323 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms