Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc3Q8R323 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc3Q8R323 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc3Q8R323 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc3Q8R323 Gm7332-201ENSMUST00000118351 454 ntBASIC20.64■□□□□ 0.89
Rfc3Q8R323 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.64■□□□□ 0.89
Rfc3Q8R323 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc3Q8R323 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Terc-201ENSMUST00000082862 423 ntBASIC20.63■□□□□ 0.89
Rfc3Q8R323 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Rfc3Q8R323 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rfc3Q8R323 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.61■□□□□ 0.89
Rfc3Q8R323 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc3Q8R323 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.61■□□□□ 0.89
Rfc3Q8R323 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc3Q8R323 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc3Q8R323 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.6■□□□□ 0.89
Rfc3Q8R323 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.6■□□□□ 0.89
Rfc3Q8R323 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc3Q8R323 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.6■□□□□ 0.89
Rfc3Q8R323 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Gm14523-201ENSMUST00000117260 558 ntBASIC20.59■□□□□ 0.89
Rfc3Q8R323 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.59■□□□□ 0.89
Rfc3Q8R323 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc3Q8R323 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rfc3Q8R323 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc3Q8R323 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.58■□□□□ 0.89
Rfc3Q8R323 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Rfc3Q8R323 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Rfc3Q8R323 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc3Q8R323 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rfc3Q8R323 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc3Q8R323 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.56■□□□□ 0.88
Rfc3Q8R323 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc3Q8R323 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.56■□□□□ 0.88
Rfc3Q8R323 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.55■□□□□ 0.88
Rfc3Q8R323 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
Rfc3Q8R323 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc3Q8R323 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.54■□□□□ 0.88
Rfc3Q8R323 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc3Q8R323 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc3Q8R323 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc3Q8R323 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc3Q8R323 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc3Q8R323 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc3Q8R323 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc3Q8R323 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc3Q8R323 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc3Q8R323 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Rfc3Q8R323 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfc3Q8R323 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.51■□□□□ 0.87
Rfc3Q8R323 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc3Q8R323 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc3Q8R323 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.49■□□□□ 0.87
Rfc3Q8R323 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc3Q8R323 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc3Q8R323 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc3Q8R323 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc3Q8R323 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms