Protein–RNA interactions for Protein: Q8R040

Rpp21, Ribonuclease P protein subunit p21, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp21Q8R040 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp21Q8R040 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rpp21Q8R040 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp21Q8R040 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp21Q8R040 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp21Q8R040 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.47■□□□□ 0.55
Rpp21Q8R040 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp21Q8R040 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rpp21Q8R040 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp21Q8R040 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rpp21Q8R040 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp21Q8R040 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.46■□□□□ 0.55
Rpp21Q8R040 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp21Q8R040 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp21Q8R040 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp21Q8R040 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp21Q8R040 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp21Q8R040 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp21Q8R040 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp21Q8R040 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp21Q8R040 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp21Q8R040 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.45■□□□□ 0.54
Rpp21Q8R040 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Rpp21Q8R040 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp21Q8R040 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.44■□□□□ 0.54
Rpp21Q8R040 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.44■□□□□ 0.54
Rpp21Q8R040 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.44■□□□□ 0.54
Rpp21Q8R040 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp21Q8R040 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Rpp21Q8R040 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rpp21Q8R040 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp21Q8R040 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.43■□□□□ 0.54
Rpp21Q8R040 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp21Q8R040 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Rpp21Q8R040 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp21Q8R040 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp21Q8R040 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rpp21Q8R040 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp21Q8R040 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp21Q8R040 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp21Q8R040 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.42■□□□□ 0.54
Rpp21Q8R040 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.41■□□□□ 0.54
Rpp21Q8R040 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp21Q8R040 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.41■□□□□ 0.54
Rpp21Q8R040 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp21Q8R040 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rpp21Q8R040 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.41■□□□□ 0.54
Rpp21Q8R040 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp21Q8R040 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp21Q8R040 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp21Q8R040 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rpp21Q8R040 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rpp21Q8R040 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.4■□□□□ 0.54
Rpp21Q8R040 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp21Q8R040 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp21Q8R040 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp21Q8R040 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rpp21Q8R040 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp21Q8R040 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.39■□□□□ 0.53
Rpp21Q8R040 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpp21Q8R040 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp21Q8R040 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp21Q8R040 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp21Q8R040 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp21Q8R040 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp21Q8R040 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp21Q8R040 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp21Q8R040 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.36■□□□□ 0.53
Rpp21Q8R040 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp21Q8R040 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp21Q8R040 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rpp21Q8R040 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp21Q8R040 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rpp21Q8R040 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp21Q8R040 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp21Q8R040 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp21Q8R040 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp21Q8R040 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.33■□□□□ 0.52
Rpp21Q8R040 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp21Q8R040 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp21Q8R040 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp21Q8R040 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp21Q8R040 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rpp21Q8R040 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rpp21Q8R040 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp21Q8R040 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp21Q8R040 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp21Q8R040 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp21Q8R040 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp21Q8R040 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp21Q8R040 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp21Q8R040 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms