Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Trim61Q8JZK6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Trim61Q8JZK6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Trim61Q8JZK6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim61Q8JZK6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.81■■□□□ 1.4
Trim61Q8JZK6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Trim61Q8JZK6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim61Q8JZK6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim61Q8JZK6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.8■■□□□ 1.4
Trim61Q8JZK6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Trim61Q8JZK6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.79■■□□□ 1.4
Trim61Q8JZK6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim61Q8JZK6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim61Q8JZK6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.78■■□□□ 1.4
Trim61Q8JZK6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim61Q8JZK6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim61Q8JZK6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim61Q8JZK6 Gm5812-201ENSMUST00000061073 957 ntBASIC23.77■■□□□ 1.4
Trim61Q8JZK6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim61Q8JZK6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim61Q8JZK6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Trim61Q8JZK6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim61Q8JZK6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.75■■□□□ 1.39
Trim61Q8JZK6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim61Q8JZK6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
Trim61Q8JZK6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim61Q8JZK6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Trim61Q8JZK6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim61Q8JZK6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim61Q8JZK6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim61Q8JZK6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Trim61Q8JZK6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim61Q8JZK6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trim61Q8JZK6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim61Q8JZK6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
Trim61Q8JZK6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Trim61Q8JZK6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim61Q8JZK6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim61Q8JZK6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim61Q8JZK6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim61Q8JZK6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.7■■□□□ 1.38
Trim61Q8JZK6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim61Q8JZK6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Trim61Q8JZK6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.69■■□□□ 1.38
Trim61Q8JZK6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Trim61Q8JZK6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim61Q8JZK6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim61Q8JZK6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Trim61Q8JZK6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Trim61Q8JZK6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim61Q8JZK6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.67■■□□□ 1.38
Trim61Q8JZK6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim61Q8JZK6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim61Q8JZK6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim61Q8JZK6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim61Q8JZK6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trim61Q8JZK6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim61Q8JZK6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim61Q8JZK6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trim61Q8JZK6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.65■■□□□ 1.38
Trim61Q8JZK6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Trim61Q8JZK6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
Trim61Q8JZK6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim61Q8JZK6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim61Q8JZK6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.63■■□□□ 1.37
Trim61Q8JZK6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim61Q8JZK6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim61Q8JZK6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim61Q8JZK6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim61Q8JZK6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trim61Q8JZK6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Trim61Q8JZK6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.62■■□□□ 1.37
Trim61Q8JZK6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Trim61Q8JZK6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim61Q8JZK6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trim61Q8JZK6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim61Q8JZK6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim61Q8JZK6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim61Q8JZK6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.6■■□□□ 1.37
Trim61Q8JZK6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.6■■□□□ 1.37
Trim61Q8JZK6 Gm15546-201ENSMUST00000122095 826 ntBASIC23.59■■□□□ 1.37
Trim61Q8JZK6 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.59■■□□□ 1.37
Trim61Q8JZK6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Trim61Q8JZK6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim61Q8JZK6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim61Q8JZK6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Trim61Q8JZK6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.58■■□□□ 1.37
Trim61Q8JZK6 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.58■■□□□ 1.37
Trim61Q8JZK6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim61Q8JZK6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim61Q8JZK6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim61Q8JZK6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Trim61Q8JZK6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Trim61Q8JZK6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim61Q8JZK6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Trim61Q8JZK6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim61Q8JZK6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Trim61Q8JZK6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trim61Q8JZK6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim61Q8JZK6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms