Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PdgfcQ8CI19 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PdgfcQ8CI19 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PdgfcQ8CI19 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PdgfcQ8CI19 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.24■■□□□ 1.63
PdgfcQ8CI19 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PdgfcQ8CI19 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PdgfcQ8CI19 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.23■■□□□ 1.63
PdgfcQ8CI19 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
PdgfcQ8CI19 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.23■■□□□ 1.63
PdgfcQ8CI19 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PdgfcQ8CI19 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.22■■□□□ 1.63
PdgfcQ8CI19 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PdgfcQ8CI19 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PdgfcQ8CI19 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PdgfcQ8CI19 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PdgfcQ8CI19 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
PdgfcQ8CI19 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PdgfcQ8CI19 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.2■■□□□ 1.62
PdgfcQ8CI19 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.2■■□□□ 1.62
PdgfcQ8CI19 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PdgfcQ8CI19 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PdgfcQ8CI19 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PdgfcQ8CI19 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.19■■□□□ 1.62
PdgfcQ8CI19 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
PdgfcQ8CI19 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PdgfcQ8CI19 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PdgfcQ8CI19 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PdgfcQ8CI19 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.18■■□□□ 1.62
PdgfcQ8CI19 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PdgfcQ8CI19 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PdgfcQ8CI19 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PdgfcQ8CI19 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PdgfcQ8CI19 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.17■■□□□ 1.62
PdgfcQ8CI19 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.17■■□□□ 1.62
PdgfcQ8CI19 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PdgfcQ8CI19 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PdgfcQ8CI19 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PdgfcQ8CI19 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PdgfcQ8CI19 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
PdgfcQ8CI19 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.16■■□□□ 1.62
PdgfcQ8CI19 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.16■■□□□ 1.62
PdgfcQ8CI19 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PdgfcQ8CI19 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PdgfcQ8CI19 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.15■■□□□ 1.62
PdgfcQ8CI19 Gm43566-201ENSMUST00000196851 808 ntBASIC25.15■■□□□ 1.62
PdgfcQ8CI19 Gm15820-201ENSMUST00000201566 728 ntBASIC25.15■■□□□ 1.62
PdgfcQ8CI19 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PdgfcQ8CI19 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PdgfcQ8CI19 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.13■■□□□ 1.61
PdgfcQ8CI19 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PdgfcQ8CI19 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PdgfcQ8CI19 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PdgfcQ8CI19 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PdgfcQ8CI19 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.12■■□□□ 1.61
PdgfcQ8CI19 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PdgfcQ8CI19 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PdgfcQ8CI19 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PdgfcQ8CI19 Gm45444-201ENSMUST00000211394 898 ntBASIC25.11■■□□□ 1.61
PdgfcQ8CI19 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.1■■□□□ 1.61
PdgfcQ8CI19 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PdgfcQ8CI19 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PdgfcQ8CI19 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PdgfcQ8CI19 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PdgfcQ8CI19 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PdgfcQ8CI19 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PdgfcQ8CI19 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.09■■□□□ 1.61
PdgfcQ8CI19 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PdgfcQ8CI19 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PdgfcQ8CI19 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PdgfcQ8CI19 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.07■■□□□ 1.6
PdgfcQ8CI19 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
PdgfcQ8CI19 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PdgfcQ8CI19 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.06■■□□□ 1.6
PdgfcQ8CI19 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PdgfcQ8CI19 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PdgfcQ8CI19 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PdgfcQ8CI19 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PdgfcQ8CI19 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PdgfcQ8CI19 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PdgfcQ8CI19 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
PdgfcQ8CI19 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PdgfcQ8CI19 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PdgfcQ8CI19 Gm15039-201ENSMUST00000118914 875 ntBASIC25.03■■□□□ 1.6
PdgfcQ8CI19 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.03■■□□□ 1.6
PdgfcQ8CI19 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PdgfcQ8CI19 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PdgfcQ8CI19 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PdgfcQ8CI19 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PdgfcQ8CI19 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
PdgfcQ8CI19 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.01■■□□□ 1.59
PdgfcQ8CI19 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.01■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms