Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pabpc5Q8C7D3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pabpc5Q8C7D3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pabpc5Q8C7D3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pabpc5Q8C7D3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pabpc5Q8C7D3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pabpc5Q8C7D3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.4■■□□□ 1.18
Pabpc5Q8C7D3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pabpc5Q8C7D3 Gm7332-201ENSMUST00000118351 454 ntBASIC22.4■■□□□ 1.18
Pabpc5Q8C7D3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.4■■□□□ 1.18
Pabpc5Q8C7D3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.4■■□□□ 1.18
Pabpc5Q8C7D3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pabpc5Q8C7D3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pabpc5Q8C7D3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pabpc5Q8C7D3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pabpc5Q8C7D3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pabpc5Q8C7D3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.39■■□□□ 1.17
Pabpc5Q8C7D3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pabpc5Q8C7D3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pabpc5Q8C7D3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pabpc5Q8C7D3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pabpc5Q8C7D3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pabpc5Q8C7D3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Pabpc5Q8C7D3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pabpc5Q8C7D3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pabpc5Q8C7D3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.38■■□□□ 1.17
Pabpc5Q8C7D3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pabpc5Q8C7D3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pabpc5Q8C7D3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pabpc5Q8C7D3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pabpc5Q8C7D3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pabpc5Q8C7D3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pabpc5Q8C7D3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pabpc5Q8C7D3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pabpc5Q8C7D3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pabpc5Q8C7D3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pabpc5Q8C7D3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pabpc5Q8C7D3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pabpc5Q8C7D3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pabpc5Q8C7D3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pabpc5Q8C7D3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pabpc5Q8C7D3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pabpc5Q8C7D3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pabpc5Q8C7D3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pabpc5Q8C7D3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pabpc5Q8C7D3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pabpc5Q8C7D3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pabpc5Q8C7D3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pabpc5Q8C7D3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pabpc5Q8C7D3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pabpc5Q8C7D3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Pabpc5Q8C7D3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pabpc5Q8C7D3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pabpc5Q8C7D3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pabpc5Q8C7D3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pabpc5Q8C7D3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pabpc5Q8C7D3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pabpc5Q8C7D3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pabpc5Q8C7D3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pabpc5Q8C7D3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.31■■□□□ 1.16
Pabpc5Q8C7D3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pabpc5Q8C7D3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.3■■□□□ 1.16
Pabpc5Q8C7D3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.3■■□□□ 1.16
Pabpc5Q8C7D3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pabpc5Q8C7D3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pabpc5Q8C7D3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pabpc5Q8C7D3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pabpc5Q8C7D3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pabpc5Q8C7D3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.29■■□□□ 1.16
Pabpc5Q8C7D3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pabpc5Q8C7D3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pabpc5Q8C7D3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pabpc5Q8C7D3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pabpc5Q8C7D3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pabpc5Q8C7D3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pabpc5Q8C7D3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pabpc5Q8C7D3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pabpc5Q8C7D3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pabpc5Q8C7D3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.28■■□□□ 1.16
Pabpc5Q8C7D3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pabpc5Q8C7D3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pabpc5Q8C7D3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.27■■□□□ 1.16
Pabpc5Q8C7D3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pabpc5Q8C7D3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pabpc5Q8C7D3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pabpc5Q8C7D3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pabpc5Q8C7D3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pabpc5Q8C7D3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Pabpc5Q8C7D3 Gm27502-201ENSMUST00000183495 199 ntBASIC22.26■■□□□ 1.15
Pabpc5Q8C7D3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pabpc5Q8C7D3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.26■■□□□ 1.15
Pabpc5Q8C7D3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms