Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3rf2Q8BZT2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3rf2Q8BZT2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sh3rf2Q8BZT2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sh3rf2Q8BZT2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Sh3rf2Q8BZT2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sh3rf2Q8BZT2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sh3rf2Q8BZT2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sh3rf2Q8BZT2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf2Q8BZT2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sh3rf2Q8BZT2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sh3rf2Q8BZT2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sh3rf2Q8BZT2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf2Q8BZT2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf2Q8BZT2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf2Q8BZT2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.94■■□□□ 1.26
Sh3rf2Q8BZT2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf2Q8BZT2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf2Q8BZT2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Sh3rf2Q8BZT2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Sh3rf2Q8BZT2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sh3rf2Q8BZT2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sh3rf2Q8BZT2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Sh3rf2Q8BZT2 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.92■■□□□ 1.26
Sh3rf2Q8BZT2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3rf2Q8BZT2 Gm5921-201ENSMUST00000075898 882 ntBASIC22.91■■□□□ 1.26
Sh3rf2Q8BZT2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3rf2Q8BZT2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf2Q8BZT2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf2Q8BZT2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf2Q8BZT2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf2Q8BZT2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf2Q8BZT2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.9■■□□□ 1.26
Sh3rf2Q8BZT2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf2Q8BZT2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Sh3rf2Q8BZT2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Sh3rf2Q8BZT2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Sh3rf2Q8BZT2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.89■■□□□ 1.25
Sh3rf2Q8BZT2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Sh3rf2Q8BZT2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Sh3rf2Q8BZT2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sh3rf2Q8BZT2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Sh3rf2Q8BZT2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3rf2Q8BZT2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Sh3rf2Q8BZT2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3rf2Q8BZT2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3rf2Q8BZT2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Sh3rf2Q8BZT2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3rf2Q8BZT2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf2Q8BZT2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf2Q8BZT2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
Sh3rf2Q8BZT2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf2Q8BZT2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Sh3rf2Q8BZT2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf2Q8BZT2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3rf2Q8BZT2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.85■■□□□ 1.25
Sh3rf2Q8BZT2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.85■■□□□ 1.25
Sh3rf2Q8BZT2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf2Q8BZT2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf2Q8BZT2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf2Q8BZT2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf2Q8BZT2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf2Q8BZT2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf2Q8BZT2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf2Q8BZT2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Sh3rf2Q8BZT2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Sh3rf2Q8BZT2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sh3rf2Q8BZT2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sh3rf2Q8BZT2 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.81■■□□□ 1.24
Sh3rf2Q8BZT2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.81■■□□□ 1.24
Sh3rf2Q8BZT2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sh3rf2Q8BZT2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3rf2Q8BZT2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3rf2Q8BZT2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3rf2Q8BZT2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3rf2Q8BZT2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Sh3rf2Q8BZT2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3rf2Q8BZT2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3rf2Q8BZT2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Sh3rf2Q8BZT2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf2Q8BZT2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf2Q8BZT2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf2Q8BZT2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf2Q8BZT2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf2Q8BZT2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.23
Sh3rf2Q8BZT2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Sh3rf2Q8BZT2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3rf2Q8BZT2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.76■■□□□ 1.23
Sh3rf2Q8BZT2 Gm5812-201ENSMUST00000061073 957 ntBASIC22.76■■□□□ 1.23
Sh3rf2Q8BZT2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms