Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm11Q8BUV6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm11Q8BUV6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
Lsm11Q8BUV6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm11Q8BUV6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm11Q8BUV6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm11Q8BUV6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm11Q8BUV6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lsm11Q8BUV6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm11Q8BUV6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm11Q8BUV6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm11Q8BUV6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm11Q8BUV6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm11Q8BUV6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.12■□□□□ 0.65
Lsm11Q8BUV6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm11Q8BUV6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm11Q8BUV6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm11Q8BUV6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Lsm11Q8BUV6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.11■□□□□ 0.65
Lsm11Q8BUV6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lsm11Q8BUV6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lsm11Q8BUV6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm11Q8BUV6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm11Q8BUV6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm11Q8BUV6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Lsm11Q8BUV6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm11Q8BUV6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm11Q8BUV6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.09■□□□□ 0.65
Lsm11Q8BUV6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm11Q8BUV6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Lsm11Q8BUV6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lsm11Q8BUV6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm11Q8BUV6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm11Q8BUV6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.08■□□□□ 0.64
Lsm11Q8BUV6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.07■□□□□ 0.64
Lsm11Q8BUV6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Lsm11Q8BUV6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Lsm11Q8BUV6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Lsm11Q8BUV6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm11Q8BUV6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm11Q8BUV6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm11Q8BUV6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Lsm11Q8BUV6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm11Q8BUV6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm11Q8BUV6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Lsm11Q8BUV6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm11Q8BUV6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm11Q8BUV6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Lsm11Q8BUV6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.05■□□□□ 0.64
Lsm11Q8BUV6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm11Q8BUV6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm11Q8BUV6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.04■□□□□ 0.64
Lsm11Q8BUV6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.03■□□□□ 0.64
Lsm11Q8BUV6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm11Q8BUV6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm11Q8BUV6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm11Q8BUV6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm11Q8BUV6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm11Q8BUV6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.02■□□□□ 0.64
Lsm11Q8BUV6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm11Q8BUV6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm11Q8BUV6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.02■□□□□ 0.63
Lsm11Q8BUV6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm11Q8BUV6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm11Q8BUV6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm11Q8BUV6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Gm6934-201ENSMUST00000194780 1905 ntBASIC19■□□□□ 0.63
Lsm11Q8BUV6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm11Q8BUV6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 Gm37136-201ENSMUST00000194368 194 ntBASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.99■□□□□ 0.63
Lsm11Q8BUV6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm11Q8BUV6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm11Q8BUV6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm11Q8BUV6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm11Q8BUV6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm11Q8BUV6 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.98■□□□□ 0.63
Lsm11Q8BUV6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Lsm11Q8BUV6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Lsm11Q8BUV6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Lsm11Q8BUV6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lsm11Q8BUV6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.96■□□□□ 0.63
Lsm11Q8BUV6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm11Q8BUV6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Lsm11Q8BUV6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm11Q8BUV6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms