Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm4Q8BKA3 Gm9806-201ENSMUST00000051080 552 ntBASIC19.47■□□□□ 0.71
Srrm4Q8BKA3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm4Q8BKA3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm4Q8BKA3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm4Q8BKA3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Srrm4Q8BKA3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm4Q8BKA3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srrm4Q8BKA3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srrm4Q8BKA3 Gm16437-201ENSMUST00000025669 507 ntBASIC19.45■□□□□ 0.7
Srrm4Q8BKA3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 Mir6538-201ENSMUST00000183713 110 ntBASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srrm4Q8BKA3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Srrm4Q8BKA3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Srrm4Q8BKA3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Srrm4Q8BKA3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srrm4Q8BKA3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srrm4Q8BKA3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srrm4Q8BKA3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Srrm4Q8BKA3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srrm4Q8BKA3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srrm4Q8BKA3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srrm4Q8BKA3 Gm11687-201ENSMUST00000118911 886 ntBASIC19.41■□□□□ 0.7
Srrm4Q8BKA3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srrm4Q8BKA3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.41■□□□□ 0.7
Srrm4Q8BKA3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 Terc-201ENSMUST00000082862 423 ntBASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srrm4Q8BKA3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Srrm4Q8BKA3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Srrm4Q8BKA3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srrm4Q8BKA3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Srrm4Q8BKA3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srrm4Q8BKA3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srrm4Q8BKA3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srrm4Q8BKA3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srrm4Q8BKA3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Srrm4Q8BKA3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Srrm4Q8BKA3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Srrm4Q8BKA3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srrm4Q8BKA3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srrm4Q8BKA3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Srrm4Q8BKA3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srrm4Q8BKA3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srrm4Q8BKA3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.34■□□□□ 0.69
Srrm4Q8BKA3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.34■□□□□ 0.69
Srrm4Q8BKA3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srrm4Q8BKA3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srrm4Q8BKA3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srrm4Q8BKA3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.34■□□□□ 0.69
Srrm4Q8BKA3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm4Q8BKA3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm4Q8BKA3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm4Q8BKA3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm4Q8BKA3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm4Q8BKA3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srrm4Q8BKA3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm4Q8BKA3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm4Q8BKA3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Srrm4Q8BKA3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm4Q8BKA3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm4Q8BKA3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm4Q8BKA3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm4Q8BKA3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.3■□□□□ 0.68
Srrm4Q8BKA3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.3■□□□□ 0.68
Srrm4Q8BKA3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Srrm4Q8BKA3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.3■□□□□ 0.68
Srrm4Q8BKA3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms