Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tdp1Q8BJ37 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Tdp1Q8BJ37 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tdp1Q8BJ37 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tdp1Q8BJ37 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.25■■□□□ 1.63
Tdp1Q8BJ37 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tdp1Q8BJ37 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tdp1Q8BJ37 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Tdp1Q8BJ37 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Tdp1Q8BJ37 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Tdp1Q8BJ37 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.24■■□□□ 1.63
Tdp1Q8BJ37 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Tdp1Q8BJ37 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.23■■□□□ 1.63
Tdp1Q8BJ37 Gm13238-201ENSMUST00000117655 780 ntBASIC25.22■■□□□ 1.63
Tdp1Q8BJ37 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Tdp1Q8BJ37 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tdp1Q8BJ37 Gm22567-201ENSMUST00000175542 342 ntBASIC25.21■■□□□ 1.63
Tdp1Q8BJ37 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.21■■□□□ 1.63
Tdp1Q8BJ37 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Tdp1Q8BJ37 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.19■■□□□ 1.62
Tdp1Q8BJ37 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.19■■□□□ 1.62
Tdp1Q8BJ37 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tdp1Q8BJ37 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tdp1Q8BJ37 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.17■■□□□ 1.62
Tdp1Q8BJ37 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Tdp1Q8BJ37 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tdp1Q8BJ37 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tdp1Q8BJ37 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Tdp1Q8BJ37 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Tdp1Q8BJ37 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Gm43566-201ENSMUST00000196851 808 ntBASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Tdp1Q8BJ37 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Tdp1Q8BJ37 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Tdp1Q8BJ37 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Tdp1Q8BJ37 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.09■■□□□ 1.61
Tdp1Q8BJ37 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Tdp1Q8BJ37 Gm45444-201ENSMUST00000211394 898 ntBASIC25.08■■□□□ 1.61
Tdp1Q8BJ37 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Tdp1Q8BJ37 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Gm15820-201ENSMUST00000201566 728 ntBASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.04■■□□□ 1.6
Tdp1Q8BJ37 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Tdp1Q8BJ37 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
Tdp1Q8BJ37 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Tdp1Q8BJ37 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Tdp1Q8BJ37 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tdp1Q8BJ37 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.03■■□□□ 1.6
Tdp1Q8BJ37 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tdp1Q8BJ37 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Tdp1Q8BJ37 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Tdp1Q8BJ37 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Tdp1Q8BJ37 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms