Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clrn3Q8BHH8 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.98■□□□□ 0.95
Clrn3Q8BHH8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clrn3Q8BHH8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.97■□□□□ 0.95
Clrn3Q8BHH8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clrn3Q8BHH8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.97■□□□□ 0.95
Clrn3Q8BHH8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn3Q8BHH8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.96■□□□□ 0.95
Clrn3Q8BHH8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn3Q8BHH8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn3Q8BHH8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn3Q8BHH8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn3Q8BHH8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Clrn3Q8BHH8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn3Q8BHH8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn3Q8BHH8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clrn3Q8BHH8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clrn3Q8BHH8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clrn3Q8BHH8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clrn3Q8BHH8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Clrn3Q8BHH8 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.93■□□□□ 0.94
Clrn3Q8BHH8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clrn3Q8BHH8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clrn3Q8BHH8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Clrn3Q8BHH8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.92■□□□□ 0.94
Clrn3Q8BHH8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clrn3Q8BHH8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clrn3Q8BHH8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clrn3Q8BHH8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn3Q8BHH8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn3Q8BHH8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Clrn3Q8BHH8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn3Q8BHH8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn3Q8BHH8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn3Q8BHH8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.91■□□□□ 0.94
Clrn3Q8BHH8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Clrn3Q8BHH8 Gm45364-201ENSMUST00000210883 159 ntBASIC20.9■□□□□ 0.94
Clrn3Q8BHH8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Clrn3Q8BHH8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn3Q8BHH8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clrn3Q8BHH8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Clrn3Q8BHH8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clrn3Q8BHH8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clrn3Q8BHH8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.89■□□□□ 0.93
Clrn3Q8BHH8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.89■□□□□ 0.93
Clrn3Q8BHH8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn3Q8BHH8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn3Q8BHH8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn3Q8BHH8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn3Q8BHH8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.88■□□□□ 0.93
Clrn3Q8BHH8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn3Q8BHH8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn3Q8BHH8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn3Q8BHH8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn3Q8BHH8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn3Q8BHH8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn3Q8BHH8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn3Q8BHH8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.86■□□□□ 0.93
Clrn3Q8BHH8 Gm6311-201ENSMUST00000073790 878 ntBASIC20.86■□□□□ 0.93
Clrn3Q8BHH8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn3Q8BHH8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn3Q8BHH8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.84■□□□□ 0.93
Clrn3Q8BHH8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Clrn3Q8BHH8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn3Q8BHH8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn3Q8BHH8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Clrn3Q8BHH8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn3Q8BHH8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn3Q8BHH8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Clrn3Q8BHH8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clrn3Q8BHH8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clrn3Q8BHH8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.83■□□□□ 0.92
Clrn3Q8BHH8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clrn3Q8BHH8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Clrn3Q8BHH8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn3Q8BHH8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn3Q8BHH8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Clrn3Q8BHH8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn3Q8BHH8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn3Q8BHH8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn3Q8BHH8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn3Q8BHH8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn3Q8BHH8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn3Q8BHH8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms