Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trnp1Q80ZI1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Trnp1Q80ZI1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trnp1Q80ZI1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Trnp1Q80ZI1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trnp1Q80ZI1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trnp1Q80ZI1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trnp1Q80ZI1 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.17■■□□□ 1.78
Trnp1Q80ZI1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Trnp1Q80ZI1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trnp1Q80ZI1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.15■■□□□ 1.78
Trnp1Q80ZI1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.15■■□□□ 1.78
Trnp1Q80ZI1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.77
Trnp1Q80ZI1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trnp1Q80ZI1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.13■■□□□ 1.77
Trnp1Q80ZI1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC26.13■■□□□ 1.77
Trnp1Q80ZI1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trnp1Q80ZI1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Trnp1Q80ZI1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trnp1Q80ZI1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Trnp1Q80ZI1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trnp1Q80ZI1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trnp1Q80ZI1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.08■■□□□ 1.77
Trnp1Q80ZI1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trnp1Q80ZI1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trnp1Q80ZI1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trnp1Q80ZI1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.07■■□□□ 1.76
Trnp1Q80ZI1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trnp1Q80ZI1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trnp1Q80ZI1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trnp1Q80ZI1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
Trnp1Q80ZI1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trnp1Q80ZI1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trnp1Q80ZI1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.04■■□□□ 1.76
Trnp1Q80ZI1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trnp1Q80ZI1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trnp1Q80ZI1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trnp1Q80ZI1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.03■■□□□ 1.76
Trnp1Q80ZI1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trnp1Q80ZI1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trnp1Q80ZI1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.01■■□□□ 1.75
Trnp1Q80ZI1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Trnp1Q80ZI1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.01■■□□□ 1.75
Trnp1Q80ZI1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26■■□□□ 1.75
Trnp1Q80ZI1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26■■□□□ 1.75
Trnp1Q80ZI1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Trnp1Q80ZI1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26■■□□□ 1.75
Trnp1Q80ZI1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26■■□□□ 1.75
Trnp1Q80ZI1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trnp1Q80ZI1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trnp1Q80ZI1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trnp1Q80ZI1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trnp1Q80ZI1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trnp1Q80ZI1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trnp1Q80ZI1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trnp1Q80ZI1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Trnp1Q80ZI1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trnp1Q80ZI1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Trnp1Q80ZI1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trnp1Q80ZI1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trnp1Q80ZI1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.95■■□□□ 1.75
Trnp1Q80ZI1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Gm10232-201ENSMUST00000089221 720 ntBASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trnp1Q80ZI1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.94■■□□□ 1.74
Trnp1Q80ZI1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trnp1Q80ZI1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trnp1Q80ZI1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trnp1Q80ZI1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Trnp1Q80ZI1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.92■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 976.5 ms