Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc28Q80XJ3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ttc28Q80XJ3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc28Q80XJ3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc28Q80XJ3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc28Q80XJ3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.42■□□□□ 0.7
Ttc28Q80XJ3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.42■□□□□ 0.7
Ttc28Q80XJ3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc28Q80XJ3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ttc28Q80XJ3 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.41■□□□□ 0.7
Ttc28Q80XJ3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc28Q80XJ3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc28Q80XJ3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc28Q80XJ3 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.41■□□□□ 0.7
Ttc28Q80XJ3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc28Q80XJ3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc28Q80XJ3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc28Q80XJ3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc28Q80XJ3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ttc28Q80XJ3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc28Q80XJ3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ttc28Q80XJ3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc28Q80XJ3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc28Q80XJ3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.38■□□□□ 0.69
Ttc28Q80XJ3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.38■□□□□ 0.69
Ttc28Q80XJ3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.38■□□□□ 0.69
Ttc28Q80XJ3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.38■□□□□ 0.69
Ttc28Q80XJ3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc28Q80XJ3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc28Q80XJ3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc28Q80XJ3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ttc28Q80XJ3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc28Q80XJ3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc28Q80XJ3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.36■□□□□ 0.69
Ttc28Q80XJ3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.36■□□□□ 0.69
Ttc28Q80XJ3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ttc28Q80XJ3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ttc28Q80XJ3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ttc28Q80XJ3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc28Q80XJ3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc28Q80XJ3 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.34■□□□□ 0.69
Ttc28Q80XJ3 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.33■□□□□ 0.69
Ttc28Q80XJ3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.33■□□□□ 0.68
Ttc28Q80XJ3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.32■□□□□ 0.68
Ttc28Q80XJ3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc28Q80XJ3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc28Q80XJ3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.31■□□□□ 0.68
Ttc28Q80XJ3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc28Q80XJ3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc28Q80XJ3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc28Q80XJ3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.31■□□□□ 0.68
Ttc28Q80XJ3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.31■□□□□ 0.68
Ttc28Q80XJ3 Gm10232-201ENSMUST00000089221 720 ntBASIC19.31■□□□□ 0.68
Ttc28Q80XJ3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc28Q80XJ3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc28Q80XJ3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc28Q80XJ3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.3■□□□□ 0.68
Ttc28Q80XJ3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.3■□□□□ 0.68
Ttc28Q80XJ3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc28Q80XJ3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc28Q80XJ3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc28Q80XJ3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.28■□□□□ 0.68
Ttc28Q80XJ3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc28Q80XJ3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc28Q80XJ3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.27■□□□□ 0.68
Ttc28Q80XJ3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc28Q80XJ3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc28Q80XJ3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc28Q80XJ3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.26■□□□□ 0.67
Ttc28Q80XJ3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc28Q80XJ3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc28Q80XJ3 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.26■□□□□ 0.67
Ttc28Q80XJ3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ttc28Q80XJ3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc28Q80XJ3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc28Q80XJ3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc28Q80XJ3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc28Q80XJ3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc28Q80XJ3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.21■□□□□ 0.67
Ttc28Q80XJ3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc28Q80XJ3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc28Q80XJ3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.21■□□□□ 0.67
Ttc28Q80XJ3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc28Q80XJ3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc28Q80XJ3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc28Q80XJ3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc28Q80XJ3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc28Q80XJ3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ttc28Q80XJ3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc28Q80XJ3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms