Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Tnrc18Q80WC3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
Tnrc18Q80WC3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.3■■□□□ 1.32
Tnrc18Q80WC3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.3■■□□□ 1.32
Tnrc18Q80WC3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tnrc18Q80WC3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnrc18Q80WC3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Tnrc18Q80WC3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tnrc18Q80WC3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnrc18Q80WC3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnrc18Q80WC3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnrc18Q80WC3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnrc18Q80WC3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Tnrc18Q80WC3 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.27■■□□□ 1.32
Tnrc18Q80WC3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Tnrc18Q80WC3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Tnrc18Q80WC3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tnrc18Q80WC3 Zxda-201ENSMUST00000117281 2621 ntBASIC23.27■■□□□ 1.32
Tnrc18Q80WC3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Tnrc18Q80WC3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tnrc18Q80WC3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tnrc18Q80WC3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tnrc18Q80WC3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnrc18Q80WC3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnrc18Q80WC3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Tnrc18Q80WC3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnrc18Q80WC3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.24■■□□□ 1.31
Tnrc18Q80WC3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnrc18Q80WC3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.24■■□□□ 1.31
Tnrc18Q80WC3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.23■■□□□ 1.31
Tnrc18Q80WC3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.23■■□□□ 1.31
Tnrc18Q80WC3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnrc18Q80WC3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnrc18Q80WC3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tnrc18Q80WC3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tnrc18Q80WC3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Tnrc18Q80WC3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tnrc18Q80WC3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tnrc18Q80WC3 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.2■■□□□ 1.3
Tnrc18Q80WC3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tnrc18Q80WC3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tnrc18Q80WC3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnrc18Q80WC3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnrc18Q80WC3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Tnrc18Q80WC3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tnrc18Q80WC3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.18■■□□□ 1.3
Tnrc18Q80WC3 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.17■■□□□ 1.3
Tnrc18Q80WC3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.17■■□□□ 1.3
Tnrc18Q80WC3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.16■■□□□ 1.3
Tnrc18Q80WC3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Tnrc18Q80WC3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnrc18Q80WC3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnrc18Q80WC3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.15■■□□□ 1.3
Tnrc18Q80WC3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.15■■□□□ 1.3
Tnrc18Q80WC3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Tnrc18Q80WC3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tnrc18Q80WC3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Tnrc18Q80WC3 Serp2-204ENSMUST00000228055 705 ntBASIC23.15■■□□□ 1.3
Tnrc18Q80WC3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Tnrc18Q80WC3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Tnrc18Q80WC3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tnrc18Q80WC3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tnrc18Q80WC3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tnrc18Q80WC3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tnrc18Q80WC3 Gm10232-201ENSMUST00000089221 720 ntBASIC23.12■■□□□ 1.29
Tnrc18Q80WC3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.12■■□□□ 1.29
Tnrc18Q80WC3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tnrc18Q80WC3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tnrc18Q80WC3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tnrc18Q80WC3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tnrc18Q80WC3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Tnrc18Q80WC3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.1■■□□□ 1.29
Tnrc18Q80WC3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Tnrc18Q80WC3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tnrc18Q80WC3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tnrc18Q80WC3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tnrc18Q80WC3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Tnrc18Q80WC3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tnrc18Q80WC3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Tnrc18Q80WC3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tnrc18Q80WC3 Gm21956-201ENSMUST00000179946 522 ntBASIC23.08■■□□□ 1.29
Tnrc18Q80WC3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.08■■□□□ 1.29
Tnrc18Q80WC3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tnrc18Q80WC3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Tnrc18Q80WC3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.07■■□□□ 1.28
Tnrc18Q80WC3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tnrc18Q80WC3 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.07■■□□□ 1.28
Tnrc18Q80WC3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.07■■□□□ 1.28
Tnrc18Q80WC3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Tnrc18Q80WC3 Etf1-202ENSMUST00000180351 108 ntBASIC23.06■■□□□ 1.28
Tnrc18Q80WC3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Tnrc18Q80WC3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tnrc18Q80WC3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Tnrc18Q80WC3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.06■■□□□ 1.28
Tnrc18Q80WC3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Tnrc18Q80WC3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tnrc18Q80WC3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tnrc18Q80WC3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.05■■□□□ 1.28
Tnrc18Q80WC3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tnrc18Q80WC3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms