Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc46a1Q6PEM8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc46a1Q6PEM8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc46a1Q6PEM8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Slc46a1Q6PEM8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc46a1Q6PEM8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Slc46a1Q6PEM8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc46a1Q6PEM8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a1Q6PEM8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a1Q6PEM8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.75■□□□□ 0.75
Slc46a1Q6PEM8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Slc46a1Q6PEM8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a1Q6PEM8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a1Q6PEM8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.74■□□□□ 0.75
Slc46a1Q6PEM8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc46a1Q6PEM8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc46a1Q6PEM8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc46a1Q6PEM8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.74■□□□□ 0.75
Slc46a1Q6PEM8 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.74■□□□□ 0.75
Slc46a1Q6PEM8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc46a1Q6PEM8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc46a1Q6PEM8 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.73■□□□□ 0.75
Slc46a1Q6PEM8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.73■□□□□ 0.75
Slc46a1Q6PEM8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc46a1Q6PEM8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a1Q6PEM8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Slc46a1Q6PEM8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a1Q6PEM8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a1Q6PEM8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a1Q6PEM8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a1Q6PEM8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Slc46a1Q6PEM8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a1Q6PEM8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc46a1Q6PEM8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc46a1Q6PEM8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc46a1Q6PEM8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.69■□□□□ 0.74
Slc46a1Q6PEM8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a1Q6PEM8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slc46a1Q6PEM8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a1Q6PEM8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc46a1Q6PEM8 Gm10420-201ENSMUST00000121713 882 ntBASIC19.68■□□□□ 0.74
Slc46a1Q6PEM8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.68■□□□□ 0.74
Slc46a1Q6PEM8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a1Q6PEM8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a1Q6PEM8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a1Q6PEM8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a1Q6PEM8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a1Q6PEM8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a1Q6PEM8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a1Q6PEM8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.66■□□□□ 0.74
Slc46a1Q6PEM8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a1Q6PEM8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a1Q6PEM8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc46a1Q6PEM8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc46a1Q6PEM8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Slc46a1Q6PEM8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc46a1Q6PEM8 Gm44428-201ENSMUST00000204474 874 ntBASIC19.65■□□□□ 0.74
Slc46a1Q6PEM8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc46a1Q6PEM8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc46a1Q6PEM8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc46a1Q6PEM8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc46a1Q6PEM8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc46a1Q6PEM8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc46a1Q6PEM8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Slc46a1Q6PEM8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc46a1Q6PEM8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc46a1Q6PEM8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.62■□□□□ 0.73
Slc46a1Q6PEM8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc46a1Q6PEM8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Slc46a1Q6PEM8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc46a1Q6PEM8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc46a1Q6PEM8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slc46a1Q6PEM8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Slc46a1Q6PEM8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.61■□□□□ 0.73
Slc46a1Q6PEM8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc46a1Q6PEM8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc46a1Q6PEM8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc46a1Q6PEM8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc46a1Q6PEM8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc46a1Q6PEM8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc46a1Q6PEM8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.6■□□□□ 0.73
Slc46a1Q6PEM8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc46a1Q6PEM8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc46a1Q6PEM8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Slc46a1Q6PEM8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc46a1Q6PEM8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc46a1Q6PEM8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Slc46a1Q6PEM8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc46a1Q6PEM8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc46a1Q6PEM8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc46a1Q6PEM8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc46a1Q6PEM8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc46a1Q6PEM8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc46a1Q6PEM8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc46a1Q6PEM8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc46a1Q6PEM8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.57■□□□□ 0.72
Slc46a1Q6PEM8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc46a1Q6PEM8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc46a1Q6PEM8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slc46a1Q6PEM8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms