Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srsf1Q6PDM2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Srsf1Q6PDM2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Srsf1Q6PDM2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Srsf1Q6PDM2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srsf1Q6PDM2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srsf1Q6PDM2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srsf1Q6PDM2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Srsf1Q6PDM2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Srsf1Q6PDM2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Srsf1Q6PDM2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Srsf1Q6PDM2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srsf1Q6PDM2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srsf1Q6PDM2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.85■□□□□ 0.77
Srsf1Q6PDM2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srsf1Q6PDM2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srsf1Q6PDM2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Srsf1Q6PDM2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Srsf1Q6PDM2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.84■□□□□ 0.77
Srsf1Q6PDM2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Srsf1Q6PDM2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Srsf1Q6PDM2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Srsf1Q6PDM2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.83■□□□□ 0.77
Srsf1Q6PDM2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Srsf1Q6PDM2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.83■□□□□ 0.77
Srsf1Q6PDM2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.82■□□□□ 0.76
Srsf1Q6PDM2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.82■□□□□ 0.76
Srsf1Q6PDM2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Srsf1Q6PDM2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Srsf1Q6PDM2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Srsf1Q6PDM2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.81■□□□□ 0.76
Srsf1Q6PDM2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.81■□□□□ 0.76
Srsf1Q6PDM2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Srsf1Q6PDM2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Srsf1Q6PDM2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Srsf1Q6PDM2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Srsf1Q6PDM2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.8■□□□□ 0.76
Srsf1Q6PDM2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Srsf1Q6PDM2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Srsf1Q6PDM2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Srsf1Q6PDM2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srsf1Q6PDM2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Srsf1Q6PDM2 Gm21956-201ENSMUST00000179946 522 ntBASIC19.78■□□□□ 0.76
Srsf1Q6PDM2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Srsf1Q6PDM2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Srsf1Q6PDM2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Srsf1Q6PDM2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Gm10232-201ENSMUST00000089221 720 ntBASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Srsf1Q6PDM2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Srsf1Q6PDM2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.75■□□□□ 0.75
Srsf1Q6PDM2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Srsf1Q6PDM2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Srsf1Q6PDM2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.75■□□□□ 0.75
Srsf1Q6PDM2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Srsf1Q6PDM2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Srsf1Q6PDM2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Srsf1Q6PDM2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Srsf1Q6PDM2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.73■□□□□ 0.75
Srsf1Q6PDM2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Srsf1Q6PDM2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.73■□□□□ 0.75
Srsf1Q6PDM2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.73■□□□□ 0.75
Srsf1Q6PDM2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Srsf1Q6PDM2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Srsf1Q6PDM2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Srsf1Q6PDM2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Srsf1Q6PDM2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Srsf1Q6PDM2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Srsf1Q6PDM2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Srsf1Q6PDM2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Srsf1Q6PDM2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srsf1Q6PDM2 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.7■□□□□ 0.74
Srsf1Q6PDM2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms