Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.39■■□□□ 1.66
ShbQ6PD21 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.39■■□□□ 1.66
ShbQ6PD21 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
ShbQ6PD21 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ShbQ6PD21 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.38■■□□□ 1.65
ShbQ6PD21 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.38■■□□□ 1.65
ShbQ6PD21 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ShbQ6PD21 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ShbQ6PD21 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ShbQ6PD21 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ShbQ6PD21 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ShbQ6PD21 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.36■■□□□ 1.65
ShbQ6PD21 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ShbQ6PD21 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ShbQ6PD21 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ShbQ6PD21 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ShbQ6PD21 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ShbQ6PD21 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ShbQ6PD21 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ShbQ6PD21 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.33■■□□□ 1.65
ShbQ6PD21 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.33■■□□□ 1.65
ShbQ6PD21 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ShbQ6PD21 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ShbQ6PD21 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.32■■□□□ 1.64
ShbQ6PD21 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ShbQ6PD21 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ShbQ6PD21 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ShbQ6PD21 Etf1-202ENSMUST00000180351 108 ntBASIC25.31■■□□□ 1.64
ShbQ6PD21 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ShbQ6PD21 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.31■■□□□ 1.64
ShbQ6PD21 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
ShbQ6PD21 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.3■■□□□ 1.64
ShbQ6PD21 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.3■■□□□ 1.64
ShbQ6PD21 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShbQ6PD21 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.29■■□□□ 1.64
ShbQ6PD21 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
ShbQ6PD21 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShbQ6PD21 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShbQ6PD21 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.28■■□□□ 1.64
ShbQ6PD21 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ShbQ6PD21 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ShbQ6PD21 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
ShbQ6PD21 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ShbQ6PD21 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ShbQ6PD21 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ShbQ6PD21 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ShbQ6PD21 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ShbQ6PD21 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ShbQ6PD21 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
ShbQ6PD21 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ShbQ6PD21 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ShbQ6PD21 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ShbQ6PD21 Serp2-204ENSMUST00000228055 705 ntBASIC25.25■■□□□ 1.63
ShbQ6PD21 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
ShbQ6PD21 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
ShbQ6PD21 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ShbQ6PD21 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ShbQ6PD21 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ShbQ6PD21 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.22■■□□□ 1.63
ShbQ6PD21 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ShbQ6PD21 Gm10232-201ENSMUST00000089221 720 ntBASIC25.22■■□□□ 1.63
ShbQ6PD21 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.22■■□□□ 1.63
ShbQ6PD21 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ShbQ6PD21 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
ShbQ6PD21 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ShbQ6PD21 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.2■■□□□ 1.62
ShbQ6PD21 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ShbQ6PD21 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
ShbQ6PD21 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.19■■□□□ 1.62
ShbQ6PD21 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ShbQ6PD21 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
ShbQ6PD21 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.18■■□□□ 1.62
ShbQ6PD21 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.18■■□□□ 1.62
ShbQ6PD21 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ShbQ6PD21 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ShbQ6PD21 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ShbQ6PD21 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.17■■□□□ 1.62
ShbQ6PD21 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
ShbQ6PD21 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ShbQ6PD21 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.16■■□□□ 1.62
ShbQ6PD21 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.15■■□□□ 1.62
ShbQ6PD21 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.15■■□□□ 1.62
ShbQ6PD21 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ShbQ6PD21 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.14■■□□□ 1.62
ShbQ6PD21 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ShbQ6PD21 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.14■■□□□ 1.62
ShbQ6PD21 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.14■■□□□ 1.61
ShbQ6PD21 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ShbQ6PD21 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ShbQ6PD21 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ShbQ6PD21 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ShbQ6PD21 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.13■■□□□ 1.61
ShbQ6PD21 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.13■■□□□ 1.61
ShbQ6PD21 Zxda-201ENSMUST00000117281 2621 ntBASIC25.13■■□□□ 1.61
ShbQ6PD21 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ShbQ6PD21 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.13■■□□□ 1.61
ShbQ6PD21 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ShbQ6PD21 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ShbQ6PD21 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ShbQ6PD21 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms