Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SpenQ62504 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SpenQ62504 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
SpenQ62504 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SpenQ62504 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SpenQ62504 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SpenQ62504 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SpenQ62504 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.61■□□□□ 0.89
SpenQ62504 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.61■□□□□ 0.89
SpenQ62504 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.61■□□□□ 0.89
SpenQ62504 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SpenQ62504 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SpenQ62504 Zxda-201ENSMUST00000117281 2621 ntBASIC20.6■□□□□ 0.89
SpenQ62504 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SpenQ62504 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SpenQ62504 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SpenQ62504 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SpenQ62504 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SpenQ62504 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SpenQ62504 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.59■□□□□ 0.89
SpenQ62504 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SpenQ62504 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SpenQ62504 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SpenQ62504 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SpenQ62504 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SpenQ62504 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.58■□□□□ 0.88
SpenQ62504 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SpenQ62504 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.57■□□□□ 0.88
SpenQ62504 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SpenQ62504 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SpenQ62504 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SpenQ62504 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SpenQ62504 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SpenQ62504 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SpenQ62504 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.55■□□□□ 0.88
SpenQ62504 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SpenQ62504 Etf1-202ENSMUST00000180351 108 ntBASIC20.55■□□□□ 0.88
SpenQ62504 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.54■□□□□ 0.88
SpenQ62504 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpenQ62504 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.54■□□□□ 0.88
SpenQ62504 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SpenQ62504 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpenQ62504 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SpenQ62504 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.52■□□□□ 0.88
SpenQ62504 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SpenQ62504 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SpenQ62504 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SpenQ62504 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.52■□□□□ 0.88
SpenQ62504 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SpenQ62504 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SpenQ62504 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SpenQ62504 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpenQ62504 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpenQ62504 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpenQ62504 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpenQ62504 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpenQ62504 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpenQ62504 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpenQ62504 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.5■□□□□ 0.87
SpenQ62504 Terc-201ENSMUST00000082862 423 ntBASIC20.5■□□□□ 0.87
SpenQ62504 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpenQ62504 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SpenQ62504 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpenQ62504 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SpenQ62504 Gm21956-201ENSMUST00000179946 522 ntBASIC20.49■□□□□ 0.87
SpenQ62504 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpenQ62504 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SpenQ62504 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpenQ62504 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.48■□□□□ 0.87
SpenQ62504 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SpenQ62504 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SpenQ62504 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpenQ62504 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.48■□□□□ 0.87
SpenQ62504 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.47■□□□□ 0.87
SpenQ62504 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SpenQ62504 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.47■□□□□ 0.87
SpenQ62504 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.46■□□□□ 0.87
SpenQ62504 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SpenQ62504 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.46■□□□□ 0.87
SpenQ62504 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SpenQ62504 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SpenQ62504 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SpenQ62504 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.46■□□□□ 0.87
SpenQ62504 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SpenQ62504 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SpenQ62504 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.45■□□□□ 0.86
SpenQ62504 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
SpenQ62504 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.45■□□□□ 0.86
SpenQ62504 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SpenQ62504 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SpenQ62504 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SpenQ62504 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SpenQ62504 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SpenQ62504 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SpenQ62504 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SpenQ62504 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SpenQ62504 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SpenQ62504 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SpenQ62504 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.43■□□□□ 0.86
SpenQ62504 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms