Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lcn3Q62471 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcn3Q62471 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcn3Q62471 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lcn3Q62471 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lcn3Q62471 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lcn3Q62471 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lcn3Q62471 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lcn3Q62471 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Lcn3Q62471 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lcn3Q62471 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lcn3Q62471 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lcn3Q62471 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.38■□□□□ 0.69
Lcn3Q62471 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lcn3Q62471 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.38■□□□□ 0.69
Lcn3Q62471 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lcn3Q62471 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lcn3Q62471 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lcn3Q62471 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lcn3Q62471 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lcn3Q62471 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lcn3Q62471 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.36■□□□□ 0.69
Lcn3Q62471 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lcn3Q62471 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lcn3Q62471 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lcn3Q62471 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.36■□□□□ 0.69
Lcn3Q62471 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lcn3Q62471 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lcn3Q62471 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lcn3Q62471 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lcn3Q62471 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lcn3Q62471 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lcn3Q62471 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lcn3Q62471 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lcn3Q62471 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.34■□□□□ 0.69
Lcn3Q62471 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lcn3Q62471 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lcn3Q62471 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lcn3Q62471 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lcn3Q62471 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lcn3Q62471 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lcn3Q62471 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lcn3Q62471 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lcn3Q62471 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lcn3Q62471 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lcn3Q62471 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.31■□□□□ 0.68
Lcn3Q62471 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lcn3Q62471 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lcn3Q62471 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lcn3Q62471 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lcn3Q62471 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.31■□□□□ 0.68
Lcn3Q62471 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lcn3Q62471 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcn3Q62471 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcn3Q62471 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.29■□□□□ 0.68
Lcn3Q62471 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcn3Q62471 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lcn3Q62471 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcn3Q62471 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcn3Q62471 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcn3Q62471 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lcn3Q62471 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcn3Q62471 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcn3Q62471 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lcn3Q62471 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lcn3Q62471 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcn3Q62471 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lcn3Q62471 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcn3Q62471 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcn3Q62471 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcn3Q62471 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Lcn3Q62471 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lcn3Q62471 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lcn3Q62471 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcn3Q62471 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcn3Q62471 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lcn3Q62471 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.25■□□□□ 0.67
Lcn3Q62471 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.25■□□□□ 0.67
Lcn3Q62471 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcn3Q62471 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.24■□□□□ 0.67
Lcn3Q62471 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.24■□□□□ 0.67
Lcn3Q62471 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lcn3Q62471 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lcn3Q62471 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcn3Q62471 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Lcn3Q62471 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lcn3Q62471 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lcn3Q62471 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcn3Q62471 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lcn3Q62471 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcn3Q62471 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lcn3Q62471 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.22■□□□□ 0.67
Lcn3Q62471 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lcn3Q62471 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcn3Q62471 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcn3Q62471 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcn3Q62471 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcn3Q62471 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcn3Q62471 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lcn3Q62471 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms