Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sptbn1Q62261 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sptbn1Q62261 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.41■□□□□ 0.7
Sptbn1Q62261 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sptbn1Q62261 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sptbn1Q62261 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sptbn1Q62261 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptbn1Q62261 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sptbn1Q62261 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sptbn1Q62261 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptbn1Q62261 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.39■□□□□ 0.69
Sptbn1Q62261 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sptbn1Q62261 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptbn1Q62261 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptbn1Q62261 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sptbn1Q62261 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptbn1Q62261 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sptbn1Q62261 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sptbn1Q62261 Gm13241-201ENSMUST00000094493 780 ntBASIC19.38■□□□□ 0.69
Sptbn1Q62261 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sptbn1Q62261 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sptbn1Q62261 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptbn1Q62261 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Sptbn1Q62261 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sptbn1Q62261 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.36■□□□□ 0.69
Sptbn1Q62261 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptbn1Q62261 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptbn1Q62261 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptbn1Q62261 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sptbn1Q62261 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptbn1Q62261 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Sptbn1Q62261 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sptbn1Q62261 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Sptbn1Q62261 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.34■□□□□ 0.69
Sptbn1Q62261 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptbn1Q62261 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sptbn1Q62261 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.69
Sptbn1Q62261 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sptbn1Q62261 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sptbn1Q62261 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sptbn1Q62261 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sptbn1Q62261 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn1Q62261 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn1Q62261 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn1Q62261 Etf1-202ENSMUST00000180351 108 ntBASIC19.31■□□□□ 0.68
Sptbn1Q62261 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.31■□□□□ 0.68
Sptbn1Q62261 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn1Q62261 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sptbn1Q62261 Gm21956-201ENSMUST00000179946 522 ntBASIC19.3■□□□□ 0.68
Sptbn1Q62261 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn1Q62261 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.3■□□□□ 0.68
Sptbn1Q62261 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn1Q62261 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn1Q62261 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.29■□□□□ 0.68
Sptbn1Q62261 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.29■□□□□ 0.68
Sptbn1Q62261 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sptbn1Q62261 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn1Q62261 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.28■□□□□ 0.68
Sptbn1Q62261 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn1Q62261 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn1Q62261 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn1Q62261 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn1Q62261 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sptbn1Q62261 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn1Q62261 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sptbn1Q62261 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.27■□□□□ 0.68
Sptbn1Q62261 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sptbn1Q62261 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptbn1Q62261 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptbn1Q62261 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptbn1Q62261 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.26■□□□□ 0.67
Sptbn1Q62261 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sptbn1Q62261 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.25■□□□□ 0.67
Sptbn1Q62261 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.25■□□□□ 0.67
Sptbn1Q62261 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sptbn1Q62261 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptbn1Q62261 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.25■□□□□ 0.67
Sptbn1Q62261 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.25■□□□□ 0.67
Sptbn1Q62261 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptbn1Q62261 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptbn1Q62261 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptbn1Q62261 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptbn1Q62261 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sptbn1Q62261 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sptbn1Q62261 Zxda-201ENSMUST00000117281 2621 ntBASIC19.23■□□□□ 0.67
Sptbn1Q62261 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sptbn1Q62261 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sptbn1Q62261 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.22■□□□□ 0.67
Sptbn1Q62261 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptbn1Q62261 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sptbn1Q62261 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sptbn1Q62261 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms