Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ptch1Q61115 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ptch1Q61115 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ptch1Q61115 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC33.87■■■■□ 3.01
Ptch1Q61115 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Ptch1Q61115 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Ptch1Q61115 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Ptch1Q61115 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC33.85■■■■□ 3.01
Ptch1Q61115 Gm43445-201ENSMUST00000198564 2091 ntBASIC33.84■■■■□ 3.01
Ptch1Q61115 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Ptch1Q61115 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC33.82■■■■□ 3
Ptch1Q61115 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC33.82■■■■□ 3
Ptch1Q61115 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC33.81■■■■□ 3
Ptch1Q61115 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC33.81■■■■□ 3
Ptch1Q61115 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC33.81■■■■□ 3
Ptch1Q61115 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Ptch1Q61115 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC33.79■■■■□ 3
Ptch1Q61115 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC33.79■■■■□ 3
Ptch1Q61115 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC33.78■■■■□ 3
Ptch1Q61115 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC33.77■■■■□ 3
Ptch1Q61115 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Ptch1Q61115 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Ptch1Q61115 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC33.76■■■□□ 2.99
Ptch1Q61115 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC33.75■■■□□ 2.99
Ptch1Q61115 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Ptch1Q61115 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Ptch1Q61115 Zxda-201ENSMUST00000117281 2621 ntBASIC33.75■■■□□ 2.99
Ptch1Q61115 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC33.74■■■□□ 2.99
Ptch1Q61115 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Ptch1Q61115 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Ptch1Q61115 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Ptch1Q61115 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Ptch1Q61115 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC33.72■■■□□ 2.99
Ptch1Q61115 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC33.72■■■□□ 2.99
Ptch1Q61115 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Ptch1Q61115 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC33.72■■■□□ 2.99
Ptch1Q61115 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Ptch1Q61115 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC33.71■■■□□ 2.99
Ptch1Q61115 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC33.71■■■□□ 2.99
Ptch1Q61115 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Ptch1Q61115 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Ptch1Q61115 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Ptch1Q61115 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC33.7■■■□□ 2.98
Ptch1Q61115 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Ptch1Q61115 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Ptch1Q61115 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Ptch1Q61115 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC33.67■■■□□ 2.98
Ptch1Q61115 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
Ptch1Q61115 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Ptch1Q61115 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Ptch1Q61115 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC33.65■■■□□ 2.98
Ptch1Q61115 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC33.65■■■□□ 2.98
Ptch1Q61115 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Ptch1Q61115 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
Ptch1Q61115 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Ptch1Q61115 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC33.65■■■□□ 2.98
Ptch1Q61115 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC33.65■■■□□ 2.98
Ptch1Q61115 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Ptch1Q61115 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Ptch1Q61115 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
Ptch1Q61115 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC33.64■■■□□ 2.98
Ptch1Q61115 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Ptch1Q61115 AC117769.4-201ENSMUST00000225679 685 ntBASIC33.63■■■□□ 2.97
Ptch1Q61115 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Ptch1Q61115 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC33.63■■■□□ 2.97
Ptch1Q61115 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Ptch1Q61115 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Ptch1Q61115 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Ptch1Q61115 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC33.62■■■□□ 2.97
Ptch1Q61115 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC33.62■■■□□ 2.97
Ptch1Q61115 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Ptch1Q61115 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC33.61■■■□□ 2.97
Ptch1Q61115 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Ptch1Q61115 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Ptch1Q61115 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC33.6■■■□□ 2.97
Ptch1Q61115 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Ptch1Q61115 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC33.6■■■□□ 2.97
Ptch1Q61115 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Ptch1Q61115 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC33.6■■■□□ 2.97
Ptch1Q61115 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Ptch1Q61115 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Ptch1Q61115 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC33.58■■■□□ 2.97
Ptch1Q61115 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Ptch1Q61115 Gm4419-202ENSMUST00000226239 1431 ntBASIC33.58■■■□□ 2.97
Ptch1Q61115 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
Ptch1Q61115 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Ptch1Q61115 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Ptch1Q61115 Etf1-202ENSMUST00000180351 108 ntBASIC33.57■■■□□ 2.96
Ptch1Q61115 Gm10232-201ENSMUST00000089221 720 ntBASIC33.57■■■□□ 2.96
Ptch1Q61115 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
Ptch1Q61115 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Ptch1Q61115 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
Ptch1Q61115 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC33.55■■■□□ 2.96
Ptch1Q61115 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Ptch1Q61115 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC33.54■■■□□ 2.96
Ptch1Q61115 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC33.54■■■□□ 2.96
Ptch1Q61115 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Ptch1Q61115 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Ptch1Q61115 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC33.53■■■□□ 2.96
Ptch1Q61115 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms