Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
R3hdm4Q4VBF2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
R3hdm4Q4VBF2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
R3hdm4Q4VBF2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.44■■□□□ 1.5
R3hdm4Q4VBF2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
R3hdm4Q4VBF2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
R3hdm4Q4VBF2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
R3hdm4Q4VBF2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
R3hdm4Q4VBF2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
R3hdm4Q4VBF2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
R3hdm4Q4VBF2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
R3hdm4Q4VBF2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.42■■□□□ 1.5
R3hdm4Q4VBF2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
R3hdm4Q4VBF2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
R3hdm4Q4VBF2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
R3hdm4Q4VBF2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.41■■□□□ 1.5
R3hdm4Q4VBF2 Mir6538-201ENSMUST00000183713 110 ntBASIC24.41■■□□□ 1.5
R3hdm4Q4VBF2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
R3hdm4Q4VBF2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
R3hdm4Q4VBF2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
R3hdm4Q4VBF2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
R3hdm4Q4VBF2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
R3hdm4Q4VBF2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
R3hdm4Q4VBF2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
R3hdm4Q4VBF2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.39■■□□□ 1.5
R3hdm4Q4VBF2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
R3hdm4Q4VBF2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
R3hdm4Q4VBF2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
R3hdm4Q4VBF2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
R3hdm4Q4VBF2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
R3hdm4Q4VBF2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
R3hdm4Q4VBF2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
R3hdm4Q4VBF2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
R3hdm4Q4VBF2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
R3hdm4Q4VBF2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
R3hdm4Q4VBF2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.35■■□□□ 1.49
R3hdm4Q4VBF2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
R3hdm4Q4VBF2 Gm27502-201ENSMUST00000183495 199 ntBASIC24.35■■□□□ 1.49
R3hdm4Q4VBF2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
R3hdm4Q4VBF2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.35■■□□□ 1.49
R3hdm4Q4VBF2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
R3hdm4Q4VBF2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
R3hdm4Q4VBF2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
R3hdm4Q4VBF2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
R3hdm4Q4VBF2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
R3hdm4Q4VBF2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
R3hdm4Q4VBF2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.34■■□□□ 1.49
R3hdm4Q4VBF2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
R3hdm4Q4VBF2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
R3hdm4Q4VBF2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
R3hdm4Q4VBF2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
R3hdm4Q4VBF2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.32■■□□□ 1.48
R3hdm4Q4VBF2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
R3hdm4Q4VBF2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
R3hdm4Q4VBF2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
R3hdm4Q4VBF2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
R3hdm4Q4VBF2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
R3hdm4Q4VBF2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
R3hdm4Q4VBF2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
R3hdm4Q4VBF2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
R3hdm4Q4VBF2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.3■■□□□ 1.48
R3hdm4Q4VBF2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
R3hdm4Q4VBF2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
R3hdm4Q4VBF2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
R3hdm4Q4VBF2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
R3hdm4Q4VBF2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
R3hdm4Q4VBF2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
R3hdm4Q4VBF2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
R3hdm4Q4VBF2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.28■■□□□ 1.48
R3hdm4Q4VBF2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
R3hdm4Q4VBF2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
R3hdm4Q4VBF2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
R3hdm4Q4VBF2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
R3hdm4Q4VBF2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.27■■□□□ 1.48
R3hdm4Q4VBF2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
R3hdm4Q4VBF2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
R3hdm4Q4VBF2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
R3hdm4Q4VBF2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
R3hdm4Q4VBF2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
R3hdm4Q4VBF2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.25■■□□□ 1.47
R3hdm4Q4VBF2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.25■■□□□ 1.47
R3hdm4Q4VBF2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
R3hdm4Q4VBF2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
R3hdm4Q4VBF2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
R3hdm4Q4VBF2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
R3hdm4Q4VBF2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.24■■□□□ 1.47
R3hdm4Q4VBF2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
R3hdm4Q4VBF2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
R3hdm4Q4VBF2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
R3hdm4Q4VBF2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.24■■□□□ 1.47
R3hdm4Q4VBF2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
R3hdm4Q4VBF2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms