Protein–RNA interactions for Protein: Q4U4S6

Xirp2, Xin actin-binding repeat-containing protein 2, mousemouse

Predictions only

Length 3,784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xirp2Q4U4S6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Xirp2Q4U4S6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Xirp2Q4U4S6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xirp2Q4U4S6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xirp2Q4U4S6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xirp2Q4U4S6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.57■□□□□ 0.4
Xirp2Q4U4S6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Xirp2Q4U4S6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Xirp2Q4U4S6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xirp2Q4U4S6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xirp2Q4U4S6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xirp2Q4U4S6 Terc-201ENSMUST00000082862 423 ntBASIC17.55■□□□□ 0.4
Xirp2Q4U4S6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.55■□□□□ 0.4
Xirp2Q4U4S6 Gm9959-201ENSMUST00000068277 390 ntBASIC17.54■□□□□ 0.4
Xirp2Q4U4S6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xirp2Q4U4S6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Xirp2Q4U4S6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xirp2Q4U4S6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.53■□□□□ 0.4
Xirp2Q4U4S6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xirp2Q4U4S6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.53■□□□□ 0.4
Xirp2Q4U4S6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xirp2Q4U4S6 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.53■□□□□ 0.4
Xirp2Q4U4S6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Xirp2Q4U4S6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.52■□□□□ 0.4
Xirp2Q4U4S6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Xirp2Q4U4S6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Xirp2Q4U4S6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Xirp2Q4U4S6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Xirp2Q4U4S6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xirp2Q4U4S6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xirp2Q4U4S6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Xirp2Q4U4S6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.49■□□□□ 0.39
Xirp2Q4U4S6 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.49■□□□□ 0.39
Xirp2Q4U4S6 Gm45444-201ENSMUST00000211394 898 ntBASIC17.49■□□□□ 0.39
Xirp2Q4U4S6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xirp2Q4U4S6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.48■□□□□ 0.39
Xirp2Q4U4S6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Xirp2Q4U4S6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Xirp2Q4U4S6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xirp2Q4U4S6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xirp2Q4U4S6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Xirp2Q4U4S6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xirp2Q4U4S6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xirp2Q4U4S6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Xirp2Q4U4S6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xirp2Q4U4S6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.45■□□□□ 0.38
Xirp2Q4U4S6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Xirp2Q4U4S6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Xirp2Q4U4S6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Xirp2Q4U4S6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.45■□□□□ 0.38
Xirp2Q4U4S6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.45■□□□□ 0.38
Xirp2Q4U4S6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xirp2Q4U4S6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Xirp2Q4U4S6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.44■□□□□ 0.38
Xirp2Q4U4S6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Xirp2Q4U4S6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.44■□□□□ 0.38
Xirp2Q4U4S6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.44■□□□□ 0.38
Xirp2Q4U4S6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Xirp2Q4U4S6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.43■□□□□ 0.38
Xirp2Q4U4S6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xirp2Q4U4S6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Xirp2Q4U4S6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xirp2Q4U4S6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xirp2Q4U4S6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xirp2Q4U4S6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Xirp2Q4U4S6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xirp2Q4U4S6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xirp2Q4U4S6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Xirp2Q4U4S6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xirp2Q4U4S6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Xirp2Q4U4S6 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.41■□□□□ 0.38
Xirp2Q4U4S6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xirp2Q4U4S6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Xirp2Q4U4S6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xirp2Q4U4S6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xirp2Q4U4S6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xirp2Q4U4S6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xirp2Q4U4S6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Xirp2Q4U4S6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xirp2Q4U4S6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xirp2Q4U4S6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xirp2Q4U4S6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xirp2Q4U4S6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.39■□□□□ 0.37
Xirp2Q4U4S6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xirp2Q4U4S6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.38■□□□□ 0.37
Xirp2Q4U4S6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.38■□□□□ 0.37
Xirp2Q4U4S6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xirp2Q4U4S6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xirp2Q4U4S6 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.38■□□□□ 0.37
Xirp2Q4U4S6 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.38■□□□□ 0.37
Xirp2Q4U4S6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xirp2Q4U4S6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms