Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Defb28Q3V2L0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Defb28Q3V2L0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Defb28Q3V2L0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Defb28Q3V2L0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Defb28Q3V2L0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.18■■□□□ 1.14
Defb28Q3V2L0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Defb28Q3V2L0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.17■■□□□ 1.14
Defb28Q3V2L0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.17■■□□□ 1.14
Defb28Q3V2L0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Defb28Q3V2L0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Defb28Q3V2L0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Defb28Q3V2L0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Defb28Q3V2L0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Defb28Q3V2L0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Defb28Q3V2L0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Defb28Q3V2L0 Etf1-202ENSMUST00000180351 108 ntBASIC22.15■■□□□ 1.14
Defb28Q3V2L0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.15■■□□□ 1.14
Defb28Q3V2L0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Defb28Q3V2L0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Defb28Q3V2L0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Defb28Q3V2L0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.14■■□□□ 1.13
Defb28Q3V2L0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Defb28Q3V2L0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Defb28Q3V2L0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Defb28Q3V2L0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Defb28Q3V2L0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.13■■□□□ 1.13
Defb28Q3V2L0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Defb28Q3V2L0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Defb28Q3V2L0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Defb28Q3V2L0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Defb28Q3V2L0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Defb28Q3V2L0 Zxda-201ENSMUST00000117281 2621 ntBASIC22.11■■□□□ 1.13
Defb28Q3V2L0 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.11■■□□□ 1.13
Defb28Q3V2L0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Defb28Q3V2L0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Defb28Q3V2L0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Defb28Q3V2L0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Defb28Q3V2L0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Defb28Q3V2L0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Defb28Q3V2L0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Defb28Q3V2L0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.1■■□□□ 1.13
Defb28Q3V2L0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Defb28Q3V2L0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.09■■□□□ 1.13
Defb28Q3V2L0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.09■■□□□ 1.13
Defb28Q3V2L0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.09■■□□□ 1.13
Defb28Q3V2L0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Defb28Q3V2L0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.08■■□□□ 1.13
Defb28Q3V2L0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Defb28Q3V2L0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Defb28Q3V2L0 Gm10232-201ENSMUST00000089221 720 ntBASIC22.08■■□□□ 1.13
Defb28Q3V2L0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Defb28Q3V2L0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Defb28Q3V2L0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Defb28Q3V2L0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Defb28Q3V2L0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Defb28Q3V2L0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Defb28Q3V2L0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.06■■□□□ 1.12
Defb28Q3V2L0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Defb28Q3V2L0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.05■■□□□ 1.12
Defb28Q3V2L0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Defb28Q3V2L0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Defb28Q3V2L0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Defb28Q3V2L0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Defb28Q3V2L0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Defb28Q3V2L0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Defb28Q3V2L0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Defb28Q3V2L0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Defb28Q3V2L0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.04■■□□□ 1.12
Defb28Q3V2L0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Defb28Q3V2L0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Defb28Q3V2L0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Defb28Q3V2L0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
Defb28Q3V2L0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Defb28Q3V2L0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Defb28Q3V2L0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Defb28Q3V2L0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.03■■□□□ 1.12
Defb28Q3V2L0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Defb28Q3V2L0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.02■■□□□ 1.12
Defb28Q3V2L0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Defb28Q3V2L0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.02■■□□□ 1.12
Defb28Q3V2L0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Defb28Q3V2L0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Defb28Q3V2L0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Defb28Q3V2L0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Defb28Q3V2L0 Gm4419-202ENSMUST00000226239 1431 ntBASIC22■■□□□ 1.11
Defb28Q3V2L0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Defb28Q3V2L0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22■■□□□ 1.11
Defb28Q3V2L0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22■■□□□ 1.11
Defb28Q3V2L0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22■■□□□ 1.11
Defb28Q3V2L0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22■■□□□ 1.11
Defb28Q3V2L0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Defb28Q3V2L0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.99■■□□□ 1.11
Defb28Q3V2L0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Defb28Q3V2L0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.98■■□□□ 1.11
Defb28Q3V2L0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Defb28Q3V2L0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Defb28Q3V2L0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Defb28Q3V2L0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.98■■□□□ 1.11
Defb28Q3V2L0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms