Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Spg11Q3UHA3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.72■■□□□ 1.07
Spg11Q3UHA3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Spg11Q3UHA3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Spg11Q3UHA3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Spg11Q3UHA3 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.72■■□□□ 1.07
Spg11Q3UHA3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Spg11Q3UHA3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Spg11Q3UHA3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Spg11Q3UHA3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Spg11Q3UHA3 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.71■■□□□ 1.07
Spg11Q3UHA3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Spg11Q3UHA3 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.7■■□□□ 1.06
Spg11Q3UHA3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Spg11Q3UHA3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Spg11Q3UHA3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Spg11Q3UHA3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Spg11Q3UHA3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.69■■□□□ 1.06
Spg11Q3UHA3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Spg11Q3UHA3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Spg11Q3UHA3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Spg11Q3UHA3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.69■■□□□ 1.06
Spg11Q3UHA3 Gm44428-201ENSMUST00000204474 874 ntBASIC21.69■■□□□ 1.06
Spg11Q3UHA3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.68■■□□□ 1.06
Spg11Q3UHA3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.68■■□□□ 1.06
Spg11Q3UHA3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Spg11Q3UHA3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Spg11Q3UHA3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.67■■□□□ 1.06
Spg11Q3UHA3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Spg11Q3UHA3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Spg11Q3UHA3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Spg11Q3UHA3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Spg11Q3UHA3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Spg11Q3UHA3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Spg11Q3UHA3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Spg11Q3UHA3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Spg11Q3UHA3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.64■■□□□ 1.05
Spg11Q3UHA3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Spg11Q3UHA3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Spg11Q3UHA3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Spg11Q3UHA3 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.64■■□□□ 1.05
Spg11Q3UHA3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Spg11Q3UHA3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Spg11Q3UHA3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Spg11Q3UHA3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Spg11Q3UHA3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Spg11Q3UHA3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.62■■□□□ 1.05
Spg11Q3UHA3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Spg11Q3UHA3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.61■■□□□ 1.05
Spg11Q3UHA3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Spg11Q3UHA3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Spg11Q3UHA3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Spg11Q3UHA3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Spg11Q3UHA3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Spg11Q3UHA3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Spg11Q3UHA3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Spg11Q3UHA3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Spg11Q3UHA3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Spg11Q3UHA3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Spg11Q3UHA3 Gm27454-201ENSMUST00000185090 204 ntBASIC21.59■■□□□ 1.05
Spg11Q3UHA3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Spg11Q3UHA3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Spg11Q3UHA3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Spg11Q3UHA3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Spg11Q3UHA3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Spg11Q3UHA3 Gm8495-201ENSMUST00000188740 694 ntBASIC21.58■■□□□ 1.04
Spg11Q3UHA3 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.58■■□□□ 1.04
Spg11Q3UHA3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Spg11Q3UHA3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.57■■□□□ 1.04
Spg11Q3UHA3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Spg11Q3UHA3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.57■■□□□ 1.04
Spg11Q3UHA3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Spg11Q3UHA3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.57■■□□□ 1.04
Spg11Q3UHA3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.57■■□□□ 1.04
Spg11Q3UHA3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Spg11Q3UHA3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Spg11Q3UHA3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Spg11Q3UHA3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Spg11Q3UHA3 Gm7417-201ENSMUST00000192950 473 ntBASIC21.56■■□□□ 1.04
Spg11Q3UHA3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.55■■□□□ 1.04
Spg11Q3UHA3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Spg11Q3UHA3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Spg11Q3UHA3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Spg11Q3UHA3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.55■■□□□ 1.04
Spg11Q3UHA3 Gm12922-201ENSMUST00000120626 809 ntBASIC21.55■■□□□ 1.04
Spg11Q3UHA3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Spg11Q3UHA3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Spg11Q3UHA3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Spg11Q3UHA3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.54■■□□□ 1.04
Spg11Q3UHA3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Spg11Q3UHA3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Spg11Q3UHA3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Spg11Q3UHA3 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.54■■□□□ 1.04
Spg11Q3UHA3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Spg11Q3UHA3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Spg11Q3UHA3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Spg11Q3UHA3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Spg11Q3UHA3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Spg11Q3UHA3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Spg11Q3UHA3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms