Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc1a3P56564 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc1a3P56564 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc1a3P56564 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slc1a3P56564 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc1a3P56564 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc1a3P56564 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc1a3P56564 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc1a3P56564 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc1a3P56564 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc1a3P56564 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc1a3P56564 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc1a3P56564 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc1a3P56564 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc1a3P56564 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slc1a3P56564 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc1a3P56564 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Slc1a3P56564 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Slc1a3P56564 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.17■□□□□ 0.82
Slc1a3P56564 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc1a3P56564 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc1a3P56564 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Slc1a3P56564 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc1a3P56564 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc1a3P56564 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc1a3P56564 Gm45855-201ENSMUST00000212546 880 ntBASIC20.15■□□□□ 0.82
Slc1a3P56564 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a3P56564 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a3P56564 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Slc1a3P56564 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.14■□□□□ 0.81
Slc1a3P56564 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a3P56564 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a3P56564 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a3P56564 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.13■□□□□ 0.81
Slc1a3P56564 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a3P56564 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a3P56564 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a3P56564 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a3P56564 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Slc1a3P56564 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a3P56564 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a3P56564 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Slc1a3P56564 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.11■□□□□ 0.81
Slc1a3P56564 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.1■□□□□ 0.81
Slc1a3P56564 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a3P56564 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a3P56564 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a3P56564 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Slc1a3P56564 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc1a3P56564 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc1a3P56564 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc1a3P56564 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc1a3P56564 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Slc1a3P56564 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Slc1a3P56564 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc1a3P56564 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc1a3P56564 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc1a3P56564 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Slc1a3P56564 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc1a3P56564 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc1a3P56564 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc1a3P56564 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc1a3P56564 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc1a3P56564 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc1a3P56564 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc1a3P56564 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc1a3P56564 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc1a3P56564 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
Slc1a3P56564 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc1a3P56564 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc1a3P56564 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc1a3P56564 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.04■□□□□ 0.8
Slc1a3P56564 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Slc1a3P56564 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc1a3P56564 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc1a3P56564 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc1a3P56564 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc1a3P56564 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.03■□□□□ 0.8
Slc1a3P56564 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc1a3P56564 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.02■□□□□ 0.8
Slc1a3P56564 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Slc1a3P56564 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc1a3P56564 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc1a3P56564 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc1a3P56564 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a3P56564 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a3P56564 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Slc1a3P56564 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc1a3P56564 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a3P56564 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a3P56564 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20■□□□□ 0.79
Slc1a3P56564 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc1a3P56564 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a3P56564 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20■□□□□ 0.79
Slc1a3P56564 Gm37136-201ENSMUST00000194368 194 ntBASIC20■□□□□ 0.79
Slc1a3P56564 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a3P56564 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a3P56564 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a3P56564 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.99■□□□□ 0.79
Slc1a3P56564 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms