Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr8P56484 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.27■□□□□ 0.68
Ccr8P56484 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccr8P56484 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccr8P56484 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccr8P56484 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccr8P56484 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr8P56484 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccr8P56484 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr8P56484 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr8P56484 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr8P56484 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr8P56484 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr8P56484 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr8P56484 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr8P56484 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr8P56484 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr8P56484 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.25■□□□□ 0.67
Ccr8P56484 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr8P56484 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr8P56484 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr8P56484 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ccr8P56484 Terc-201ENSMUST00000082862 423 ntBASIC19.24■□□□□ 0.67
Ccr8P56484 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccr8P56484 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Ccr8P56484 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr8P56484 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ccr8P56484 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccr8P56484 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr8P56484 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr8P56484 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr8P56484 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr8P56484 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr8P56484 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.22■□□□□ 0.67
Ccr8P56484 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr8P56484 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr8P56484 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ccr8P56484 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr8P56484 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr8P56484 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr8P56484 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr8P56484 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ccr8P56484 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr8P56484 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr8P56484 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr8P56484 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr8P56484 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr8P56484 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ccr8P56484 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr8P56484 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccr8P56484 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.19■□□□□ 0.66
Ccr8P56484 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr8P56484 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr8P56484 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr8P56484 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr8P56484 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr8P56484 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr8P56484 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr8P56484 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccr8P56484 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccr8P56484 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr8P56484 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr8P56484 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr8P56484 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr8P56484 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccr8P56484 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr8P56484 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr8P56484 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccr8P56484 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccr8P56484 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.17■□□□□ 0.66
Ccr8P56484 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
Ccr8P56484 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccr8P56484 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccr8P56484 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.17■□□□□ 0.66
Ccr8P56484 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr8P56484 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr8P56484 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr8P56484 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr8P56484 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr8P56484 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ccr8P56484 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr8P56484 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr8P56484 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ccr8P56484 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr8P56484 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccr8P56484 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.15■□□□□ 0.66
Ccr8P56484 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccr8P56484 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccr8P56484 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccr8P56484 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccr8P56484 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.14■□□□□ 0.66
Ccr8P56484 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccr8P56484 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccr8P56484 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccr8P56484 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccr8P56484 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.14■□□□□ 0.65
Ccr8P56484 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccr8P56484 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccr8P56484 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccr8P56484 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms