Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pdx1P52946 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Pdx1P52946 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdx1P52946 Gm9806-201ENSMUST00000051080 552 ntBASIC22.29■■□□□ 1.16
Pdx1P52946 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Pdx1P52946 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pdx1P52946 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdx1P52946 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pdx1P52946 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pdx1P52946 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.28■■□□□ 1.16
Pdx1P52946 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdx1P52946 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdx1P52946 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdx1P52946 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pdx1P52946 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdx1P52946 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.26■■□□□ 1.15
Pdx1P52946 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdx1P52946 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdx1P52946 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdx1P52946 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdx1P52946 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdx1P52946 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.25■■□□□ 1.15
Pdx1P52946 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pdx1P52946 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdx1P52946 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.24■■□□□ 1.15
Pdx1P52946 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pdx1P52946 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdx1P52946 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdx1P52946 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdx1P52946 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdx1P52946 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.23■■□□□ 1.15
Pdx1P52946 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdx1P52946 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdx1P52946 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pdx1P52946 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdx1P52946 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pdx1P52946 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Pdx1P52946 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pdx1P52946 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdx1P52946 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pdx1P52946 Gm11687-201ENSMUST00000118911 886 ntBASIC22.21■■□□□ 1.15
Pdx1P52946 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pdx1P52946 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Pdx1P52946 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Pdx1P52946 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.19■■□□□ 1.14
Pdx1P52946 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdx1P52946 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdx1P52946 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdx1P52946 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.18■■□□□ 1.14
Pdx1P52946 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdx1P52946 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pdx1P52946 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdx1P52946 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
Pdx1P52946 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdx1P52946 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.17■■□□□ 1.14
Pdx1P52946 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pdx1P52946 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pdx1P52946 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdx1P52946 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.16■■□□□ 1.14
Pdx1P52946 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdx1P52946 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdx1P52946 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.16■■□□□ 1.14
Pdx1P52946 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdx1P52946 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdx1P52946 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdx1P52946 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pdx1P52946 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdx1P52946 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdx1P52946 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdx1P52946 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdx1P52946 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.15■■□□□ 1.14
Pdx1P52946 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdx1P52946 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdx1P52946 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdx1P52946 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.15■■□□□ 1.14
Pdx1P52946 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdx1P52946 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pdx1P52946 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdx1P52946 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdx1P52946 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdx1P52946 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.14■■□□□ 1.13
Pdx1P52946 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.14■■□□□ 1.13
Pdx1P52946 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.14■■□□□ 1.13
Pdx1P52946 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdx1P52946 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdx1P52946 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Pdx1P52946 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.13■■□□□ 1.13
Pdx1P52946 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdx1P52946 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.13■■□□□ 1.13
Pdx1P52946 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Pdx1P52946 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdx1P52946 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms