Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RetP35546 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.99■□□□□ 0.95
RetP35546 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RetP35546 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RetP35546 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RetP35546 Gm45364-201ENSMUST00000210883 159 ntBASIC20.98■□□□□ 0.95
RetP35546 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RetP35546 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RetP35546 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RetP35546 Gm37136-201ENSMUST00000194368 194 ntBASIC20.97■□□□□ 0.95
RetP35546 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RetP35546 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RetP35546 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RetP35546 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RetP35546 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RetP35546 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RetP35546 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RetP35546 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.95■□□□□ 0.94
RetP35546 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RetP35546 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RetP35546 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RetP35546 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RetP35546 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.94■□□□□ 0.94
RetP35546 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RetP35546 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RetP35546 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RetP35546 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.93■□□□□ 0.94
RetP35546 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RetP35546 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RetP35546 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RetP35546 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RetP35546 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RetP35546 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RetP35546 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RetP35546 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RetP35546 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RetP35546 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RetP35546 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RetP35546 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RetP35546 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RetP35546 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.9■□□□□ 0.94
RetP35546 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RetP35546 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RetP35546 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RetP35546 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RetP35546 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RetP35546 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RetP35546 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
RetP35546 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RetP35546 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RetP35546 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.89■□□□□ 0.93
RetP35546 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.89■□□□□ 0.93
RetP35546 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RetP35546 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RetP35546 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RetP35546 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
RetP35546 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RetP35546 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RetP35546 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RetP35546 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.87■□□□□ 0.93
RetP35546 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RetP35546 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RetP35546 Gm14523-201ENSMUST00000117260 558 ntBASIC20.87■□□□□ 0.93
RetP35546 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RetP35546 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RetP35546 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RetP35546 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RetP35546 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RetP35546 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RetP35546 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.85■□□□□ 0.93
RetP35546 Gm15039-201ENSMUST00000118914 875 ntBASIC20.85■□□□□ 0.93
RetP35546 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RetP35546 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RetP35546 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RetP35546 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RetP35546 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RetP35546 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RetP35546 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.83■□□□□ 0.93
RetP35546 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RetP35546 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RetP35546 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RetP35546 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.83■□□□□ 0.93
RetP35546 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RetP35546 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RetP35546 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.82■□□□□ 0.92
RetP35546 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RetP35546 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RetP35546 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RetP35546 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RetP35546 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RetP35546 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.81■□□□□ 0.92
RetP35546 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RetP35546 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RetP35546 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RetP35546 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RetP35546 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RetP35546 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RetP35546 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RetP35546 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RetP35546 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms