Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zfp28P10078 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Zfp28P10078 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zfp28P10078 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zfp28P10078 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.63■□□□□ 0.89
Zfp28P10078 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp28P10078 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp28P10078 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.62■□□□□ 0.89
Zfp28P10078 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp28P10078 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp28P10078 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Zfp28P10078 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp28P10078 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp28P10078 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp28P10078 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp28P10078 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp28P10078 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Zfp28P10078 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
Zfp28P10078 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp28P10078 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp28P10078 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp28P10078 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp28P10078 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp28P10078 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Zfp28P10078 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp28P10078 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp28P10078 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp28P10078 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp28P10078 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp28P10078 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.59■□□□□ 0.89
Zfp28P10078 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp28P10078 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp28P10078 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Zfp28P10078 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp28P10078 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Zfp28P10078 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp28P10078 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Zfp28P10078 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp28P10078 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp28P10078 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp28P10078 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Zfp28P10078 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.58■□□□□ 0.89
Zfp28P10078 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp28P10078 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp28P10078 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Zfp28P10078 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp28P10078 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp28P10078 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp28P10078 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp28P10078 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp28P10078 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Zfp28P10078 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp28P10078 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.55■□□□□ 0.88
Zfp28P10078 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp28P10078 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp28P10078 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp28P10078 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp28P10078 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp28P10078 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp28P10078 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Zfp28P10078 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp28P10078 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp28P10078 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp28P10078 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.53■□□□□ 0.88
Zfp28P10078 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp28P10078 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp28P10078 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp28P10078 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.53■□□□□ 0.88
Zfp28P10078 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp28P10078 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp28P10078 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Zfp28P10078 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp28P10078 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Zfp28P10078 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Zfp28P10078 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp28P10078 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp28P10078 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp28P10078 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.5■□□□□ 0.87
Zfp28P10078 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp28P10078 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp28P10078 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp28P10078 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Zfp28P10078 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Zfp28P10078 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zfp28P10078 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Zfp28P10078 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp28P10078 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp28P10078 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp28P10078 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp28P10078 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp28P10078 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp28P10078 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp28P10078 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp28P10078 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp28P10078 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Zfp28P10078 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp28P10078 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.46■□□□□ 0.87
Zfp28P10078 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Zfp28P10078 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp28P10078 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms