Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
ClppO88696 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ClppO88696 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ClppO88696 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ClppO88696 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.83■■□□□ 1.08
ClppO88696 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.83■■□□□ 1.08
ClppO88696 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ClppO88696 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ClppO88696 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ClppO88696 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ClppO88696 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ClppO88696 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ClppO88696 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.81■■□□□ 1.08
ClppO88696 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ClppO88696 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.81■■□□□ 1.08
ClppO88696 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ClppO88696 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.81■■□□□ 1.08
ClppO88696 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ClppO88696 Gm7332-201ENSMUST00000118351 454 ntBASIC21.8■■□□□ 1.08
ClppO88696 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ClppO88696 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ClppO88696 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ClppO88696 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.79■■□□□ 1.08
ClppO88696 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ClppO88696 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.79■■□□□ 1.08
ClppO88696 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ClppO88696 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.78■■□□□ 1.08
ClppO88696 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ClppO88696 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ClppO88696 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ClppO88696 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ClppO88696 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ClppO88696 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ClppO88696 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ClppO88696 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ClppO88696 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ClppO88696 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ClppO88696 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ClppO88696 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ClppO88696 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Gm14523-201ENSMUST00000117260 558 ntBASIC21.76■■□□□ 1.07
ClppO88696 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.76■■□□□ 1.07
ClppO88696 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClppO88696 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ClppO88696 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ClppO88696 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ClppO88696 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ClppO88696 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ClppO88696 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ClppO88696 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ClppO88696 Terc-201ENSMUST00000082862 423 ntBASIC21.74■■□□□ 1.07
ClppO88696 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ClppO88696 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ClppO88696 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.73■■□□□ 1.07
ClppO88696 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ClppO88696 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ClppO88696 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ClppO88696 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ClppO88696 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ClppO88696 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ClppO88696 Notumos-201ENSMUST00000151998 2659 ntBASIC21.73■■□□□ 1.07
ClppO88696 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ClppO88696 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.72■■□□□ 1.07
ClppO88696 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.72■■□□□ 1.07
ClppO88696 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ClppO88696 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
ClppO88696 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ClppO88696 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ClppO88696 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ClppO88696 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ClppO88696 Gm27502-201ENSMUST00000183495 199 ntBASIC21.71■■□□□ 1.07
ClppO88696 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
ClppO88696 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ClppO88696 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ClppO88696 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ClppO88696 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.7■■□□□ 1.06
ClppO88696 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ClppO88696 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClppO88696 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClppO88696 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ClppO88696 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ClppO88696 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClppO88696 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ClppO88696 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 774.4 ms