Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ubr1O70481 Gm43566-201ENSMUST00000196851 808 ntBASIC30.22■■■□□ 2.43
Ubr1O70481 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ubr1O70481 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC30.21■■■□□ 2.43
Ubr1O70481 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ubr1O70481 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Ubr1O70481 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.42
Ubr1O70481 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ubr1O70481 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Ubr1O70481 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ubr1O70481 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
Ubr1O70481 Gm5522-201ENSMUST00000189483 1242 ntBASIC30.18■■■□□ 2.42
Ubr1O70481 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ubr1O70481 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ubr1O70481 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ubr1O70481 Gm13238-201ENSMUST00000117655 780 ntBASIC30.17■■■□□ 2.42
Ubr1O70481 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ubr1O70481 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ubr1O70481 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Ubr1O70481 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ubr1O70481 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ubr1O70481 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30.16■■■□□ 2.42
Ubr1O70481 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ubr1O70481 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ubr1O70481 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Ubr1O70481 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ubr1O70481 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC30.15■■■□□ 2.42
Ubr1O70481 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ubr1O70481 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ubr1O70481 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC30.13■■■□□ 2.41
Ubr1O70481 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC30.13■■■□□ 2.41
Ubr1O70481 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Ubr1O70481 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC30.12■■■□□ 2.41
Ubr1O70481 Gm22567-201ENSMUST00000175542 342 ntBASIC30.12■■■□□ 2.41
Ubr1O70481 Gm45444-201ENSMUST00000211394 898 ntBASIC30.12■■■□□ 2.41
Ubr1O70481 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Ubr1O70481 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Ubr1O70481 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC30.1■■■□□ 2.41
Ubr1O70481 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ubr1O70481 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ubr1O70481 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ubr1O70481 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC30.08■■■□□ 2.41
Ubr1O70481 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ubr1O70481 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ubr1O70481 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC30.08■■■□□ 2.41
Ubr1O70481 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ubr1O70481 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ubr1O70481 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ubr1O70481 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Ubr1O70481 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Ubr1O70481 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ubr1O70481 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ubr1O70481 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ubr1O70481 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
Ubr1O70481 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
Ubr1O70481 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ubr1O70481 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ubr1O70481 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Ubr1O70481 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Ubr1O70481 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC30.05■■■□□ 2.4
Ubr1O70481 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC30.05■■■□□ 2.4
Ubr1O70481 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ubr1O70481 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ubr1O70481 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ubr1O70481 Gm15546-201ENSMUST00000122095 826 ntBASIC30.02■■■□□ 2.4
Ubr1O70481 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ubr1O70481 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC30■■■□□ 2.39
Ubr1O70481 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC30■■■□□ 2.39
Ubr1O70481 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30■■■□□ 2.39
Ubr1O70481 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Ubr1O70481 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Ubr1O70481 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ubr1O70481 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC29.98■■■□□ 2.39
Ubr1O70481 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Ubr1O70481 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ubr1O70481 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ubr1O70481 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.96■■■□□ 2.39
Ubr1O70481 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ubr1O70481 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Ubr1O70481 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
Ubr1O70481 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ubr1O70481 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ubr1O70481 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ubr1O70481 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Ubr1O70481 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ubr1O70481 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ubr1O70481 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Ubr1O70481 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC29.93■■■□□ 2.38
Ubr1O70481 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Ubr1O70481 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ubr1O70481 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
Ubr1O70481 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ubr1O70481 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ubr1O70481 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
Ubr1O70481 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ubr1O70481 AC117769.4-201ENSMUST00000225679 685 ntBASIC29.9■■■□□ 2.38
Ubr1O70481 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC29.9■■■□□ 2.38
Ubr1O70481 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC29.89■■■□□ 2.38
Ubr1O70481 Nsd1-203ENSMUST00000224156 1149 ntBASIC29.89■■■□□ 2.38
Ubr1O70481 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 400 ms