Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.21■□□□□ 0.51
Gm5089A1L3C8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5089A1L3C8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5089A1L3C8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5089A1L3C8 Gm43566-201ENSMUST00000196851 808 ntBASIC18.2■□□□□ 0.5
Gm5089A1L3C8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5089A1L3C8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gm5089A1L3C8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5089A1L3C8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5089A1L3C8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.19■□□□□ 0.5
Gm5089A1L3C8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Gm5089A1L3C8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Gm5089A1L3C8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm5089A1L3C8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5089A1L3C8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.18■□□□□ 0.5
Gm5089A1L3C8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Gm5089A1L3C8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5089A1L3C8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm5089A1L3C8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gm5089A1L3C8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.17■□□□□ 0.5
Gm5089A1L3C8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5089A1L3C8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5089A1L3C8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5089A1L3C8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Gm5089A1L3C8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gm5089A1L3C8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5089A1L3C8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5089A1L3C8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5089A1L3C8 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.16■□□□□ 0.5
Gm5089A1L3C8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5089A1L3C8 Gm45444-201ENSMUST00000211394 898 ntBASIC18.16■□□□□ 0.5
Gm5089A1L3C8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gm5089A1L3C8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.15■□□□□ 0.5
Gm5089A1L3C8 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.15■□□□□ 0.5
Gm5089A1L3C8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm5089A1L3C8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5089A1L3C8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5089A1L3C8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5089A1L3C8 Amer2-203ENSMUST00000225247 2662 ntBASIC18.15■□□□□ 0.5
Gm5089A1L3C8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5089A1L3C8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5089A1L3C8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm5089A1L3C8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.13■□□□□ 0.49
Gm5089A1L3C8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Gm5089A1L3C8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm5089A1L3C8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5089A1L3C8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5089A1L3C8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.12■□□□□ 0.49
Gm5089A1L3C8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5089A1L3C8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5089A1L3C8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.12■□□□□ 0.49
Gm5089A1L3C8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Gm5089A1L3C8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5089A1L3C8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5089A1L3C8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5089A1L3C8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5089A1L3C8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5089A1L3C8 Gm14117-201ENSMUST00000122417 843 ntBASIC18.09■□□□□ 0.49
Gm5089A1L3C8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm5089A1L3C8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm5089A1L3C8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm5089A1L3C8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5089A1L3C8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5089A1L3C8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5089A1L3C8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5089A1L3C8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5089A1L3C8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5089A1L3C8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm5089A1L3C8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Gm5089A1L3C8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm5089A1L3C8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5089A1L3C8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5089A1L3C8 Gm45102-201ENSMUST00000207427 857 ntBASIC18.07■□□□□ 0.48
Gm5089A1L3C8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5089A1L3C8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5089A1L3C8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm5089A1L3C8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5089A1L3C8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5089A1L3C8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Gm5089A1L3C8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.05■□□□□ 0.48
Gm5089A1L3C8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5089A1L3C8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms