Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.76■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Gm7432-201ENSMUST00000210343 879 ntBASIC15.76■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.76■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv4-53A0A0G2JFC6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.73■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Gm11599-201ENSMUST00000118720 878 ntBASIC15.72■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv4-53A0A0G2JFC6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv4-53A0A0G2JFC6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv4-53A0A0G2JFC6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv4-53A0A0G2JFC6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.68■□□□□ 0.1
Igkv4-53A0A0G2JFC6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 114.3 ms