Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav9-4A0A0B4J1K2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Trav9-4A0A0B4J1K2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
Trav9-4A0A0B4J1K2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9-4A0A0B4J1K2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav9-4A0A0B4J1K2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9-4A0A0B4J1K2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9-4A0A0B4J1K2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9-4A0A0B4J1K2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav9-4A0A0B4J1K2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.83■□□□□ 0.28
Trav9-4A0A0B4J1K2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gm16437-201ENSMUST00000025669 507 ntBASIC16.83■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gm9806-201ENSMUST00000051080 552 ntBASIC16.83■□□□□ 0.28
Trav9-4A0A0B4J1K2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9-4A0A0B4J1K2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9-4A0A0B4J1K2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9-4A0A0B4J1K2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-4A0A0B4J1K2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-4A0A0B4J1K2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9-4A0A0B4J1K2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav9-4A0A0B4J1K2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9-4A0A0B4J1K2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9-4A0A0B4J1K2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-4A0A0B4J1K2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-4A0A0B4J1K2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-4A0A0B4J1K2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gm11687-201ENSMUST00000118911 886 ntBASIC16.8■□□□□ 0.28
Trav9-4A0A0B4J1K2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-4A0A0B4J1K2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-4A0A0B4J1K2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-4A0A0B4J1K2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9-4A0A0B4J1K2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav9-4A0A0B4J1K2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav9-4A0A0B4J1K2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.79■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9-4A0A0B4J1K2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav9-4A0A0B4J1K2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gm11175-201ENSMUST00000116172 543 ntBASIC16.78■□□□□ 0.28
Trav9-4A0A0B4J1K2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9-4A0A0B4J1K2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav9-4A0A0B4J1K2 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.78■□□□□ 0.28
Trav9-4A0A0B4J1K2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav9-4A0A0B4J1K2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav9-4A0A0B4J1K2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9-4A0A0B4J1K2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9-4A0A0B4J1K2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav9-4A0A0B4J1K2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Trav9-4A0A0B4J1K2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-4A0A0B4J1K2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-4A0A0B4J1K2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-4A0A0B4J1K2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-4A0A0B4J1K2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.74■□□□□ 0.27
Trav9-4A0A0B4J1K2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav9-4A0A0B4J1K2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-4A0A0B4J1K2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-4A0A0B4J1K2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-4A0A0B4J1K2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-4A0A0B4J1K2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-4A0A0B4J1K2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-4A0A0B4J1K2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav9-4A0A0B4J1K2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-4A0A0B4J1K2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-4A0A0B4J1K2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-4A0A0B4J1K2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-4A0A0B4J1K2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-4A0A0B4J1K2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav9-4A0A0B4J1K2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-4A0A0B4J1K2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-4A0A0B4J1K2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav9-4A0A0B4J1K2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 144.1 ms