Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-4A0A075B6B4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav6-4A0A075B6B4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav6-4A0A075B6B4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-4A0A075B6B4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav6-4A0A075B6B4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-4A0A075B6B4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-4A0A075B6B4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-4A0A075B6B4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-4A0A075B6B4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-4A0A075B6B4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-4A0A075B6B4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav6-4A0A075B6B4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-4A0A075B6B4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-4A0A075B6B4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-4A0A075B6B4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-4A0A075B6B4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-4A0A075B6B4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-4A0A075B6B4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-4A0A075B6B4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-4A0A075B6B4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-4A0A075B6B4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-4A0A075B6B4 Scarna2-201ENSMUST00000157560 414 ntBASIC17.25■□□□□ 0.35
Trav6-4A0A075B6B4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-4A0A075B6B4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-4A0A075B6B4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-4A0A075B6B4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-4A0A075B6B4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav6-4A0A075B6B4 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.24■□□□□ 0.35
Trav6-4A0A075B6B4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-4A0A075B6B4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trav6-4A0A075B6B4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav6-4A0A075B6B4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-4A0A075B6B4 Gm9806-201ENSMUST00000051080 552 ntBASIC17.24■□□□□ 0.35
Trav6-4A0A075B6B4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-4A0A075B6B4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-4A0A075B6B4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-4A0A075B6B4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-4A0A075B6B4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.23■□□□□ 0.35
Trav6-4A0A075B6B4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-4A0A075B6B4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav6-4A0A075B6B4 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.23■□□□□ 0.35
Trav6-4A0A075B6B4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-4A0A075B6B4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-4A0A075B6B4 Gm11687-201ENSMUST00000118911 886 ntBASIC17.22■□□□□ 0.35
Trav6-4A0A075B6B4 Gm16437-201ENSMUST00000025669 507 ntBASIC17.22■□□□□ 0.35
Trav6-4A0A075B6B4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-4A0A075B6B4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-4A0A075B6B4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-4A0A075B6B4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-4A0A075B6B4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-4A0A075B6B4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-4A0A075B6B4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-4A0A075B6B4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-4A0A075B6B4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.19■□□□□ 0.34
Trav6-4A0A075B6B4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav6-4A0A075B6B4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-4A0A075B6B4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-4A0A075B6B4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-4A0A075B6B4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Trav6-4A0A075B6B4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav6-4A0A075B6B4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav6-4A0A075B6B4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-4A0A075B6B4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav6-4A0A075B6B4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-4A0A075B6B4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trav6-4A0A075B6B4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-4A0A075B6B4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-4A0A075B6B4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav6-4A0A075B6B4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-4A0A075B6B4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-4A0A075B6B4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-4A0A075B6B4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-4A0A075B6B4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-4A0A075B6B4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-4A0A075B6B4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-4A0A075B6B4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-4A0A075B6B4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-4A0A075B6B4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-4A0A075B6B4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-4A0A075B6B4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-4A0A075B6B4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav6-4A0A075B6B4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Trav6-4A0A075B6B4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms