Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav17A0A075B655 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav17A0A075B655 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trav17A0A075B655 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.85■□□□□ 0.45
Trav17A0A075B655 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav17A0A075B655 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav17A0A075B655 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Trav17A0A075B655 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav17A0A075B655 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav17A0A075B655 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trav17A0A075B655 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav17A0A075B655 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav17A0A075B655 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav17A0A075B655 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav17A0A075B655 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav17A0A075B655 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav17A0A075B655 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav17A0A075B655 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav17A0A075B655 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.82■□□□□ 0.44
Trav17A0A075B655 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav17A0A075B655 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav17A0A075B655 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav17A0A075B655 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav17A0A075B655 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trav17A0A075B655 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav17A0A075B655 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav17A0A075B655 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav17A0A075B655 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav17A0A075B655 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav17A0A075B655 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav17A0A075B655 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav17A0A075B655 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav17A0A075B655 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav17A0A075B655 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav17A0A075B655 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav17A0A075B655 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav17A0A075B655 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav17A0A075B655 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav17A0A075B655 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav17A0A075B655 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav17A0A075B655 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav17A0A075B655 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav17A0A075B655 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav17A0A075B655 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav17A0A075B655 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav17A0A075B655 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Trav17A0A075B655 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Trav17A0A075B655 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav17A0A075B655 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav17A0A075B655 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trav17A0A075B655 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.77■□□□□ 0.43
Trav17A0A075B655 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav17A0A075B655 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav17A0A075B655 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav17A0A075B655 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav17A0A075B655 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav17A0A075B655 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav17A0A075B655 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav17A0A075B655 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav17A0A075B655 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav17A0A075B655 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav17A0A075B655 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav17A0A075B655 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav17A0A075B655 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav17A0A075B655 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav17A0A075B655 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav17A0A075B655 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav17A0A075B655 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav17A0A075B655 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav17A0A075B655 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav17A0A075B655 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav17A0A075B655 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav17A0A075B655 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav17A0A075B655 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav17A0A075B655 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav17A0A075B655 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav17A0A075B655 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav17A0A075B655 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Trav17A0A075B655 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav17A0A075B655 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav17A0A075B655 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav17A0A075B655 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav17A0A075B655 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav17A0A075B655 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav17A0A075B655 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav17A0A075B655 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms