Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SFTPBP07988 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.97■□□□□ 0.15
SFTPBP07988 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SFTPBP07988 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.97■□□□□ 0.15
SFTPBP07988 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SFTPBP07988 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.97■□□□□ 0.15
SFTPBP07988 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.97■□□□□ 0.15
SFTPBP07988 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 AC068587.9-201ENST00000641814 219 ntBASIC15.97■□□□□ 0.15
SFTPBP07988 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SFTPBP07988 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 NOC2LP2-201ENST00000407594 1944 ntBASIC15.97■□□□□ 0.15
SFTPBP07988 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 AL499627.1-201ENST00000569373 2188 ntBASIC15.97■□□□□ 0.15
SFTPBP07988 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.97■□□□□ 0.15
SFTPBP07988 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 AL354751.1-201ENST00000412768 1863 ntBASIC15.97■□□□□ 0.15
SFTPBP07988 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SFTPBP07988 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SFTPBP07988 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 NOC2LP1-202ENST00000452600 2235 ntBASIC15.96■□□□□ 0.15
SFTPBP07988 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SFTPBP07988 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SFTPBP07988 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SFTPBP07988 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.96■□□□□ 0.15
SFTPBP07988 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.96■□□□□ 0.15
SFTPBP07988 AC211429.1-201ENST00000415277 523 ntBASIC15.96■□□□□ 0.15
SFTPBP07988 AC004951.3-201ENST00000418645 1148 ntBASIC15.96■□□□□ 0.15
SFTPBP07988 ECEL1P3-201ENST00000427961 737 ntBASIC15.96■□□□□ 0.15
SFTPBP07988 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.96■□□□□ 0.15
SFTPBP07988 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.96■□□□□ 0.15
SFTPBP07988 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SFTPBP07988 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.96■□□□□ 0.15
SFTPBP07988 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SFTPBP07988 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.96■□□□□ 0.15
SFTPBP07988 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SFTPBP07988 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.96■□□□□ 0.15
SFTPBP07988 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SFTPBP07988 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.96■□□□□ 0.14
SFTPBP07988 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SFTPBP07988 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
SFTPBP07988 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SFTPBP07988 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.96■□□□□ 0.14
SFTPBP07988 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SFTPBP07988 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SFTPBP07988 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SFTPBP07988 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.95■□□□□ 0.14
SFTPBP07988 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.95■□□□□ 0.14
SFTPBP07988 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 KRT8P3-201ENST00000519669 1449 ntBASIC15.95■□□□□ 0.14
SFTPBP07988 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.95■□□□□ 0.14
SFTPBP07988 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.95■□□□□ 0.14
SFTPBP07988 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.95■□□□□ 0.14
SFTPBP07988 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SFTPBP07988 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SFTPBP07988 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 AC068880.1-201ENST00000507289 2297 ntBASIC15.95■□□□□ 0.14
SFTPBP07988 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 AC087499.1-201ENST00000418141 1075 ntBASIC15.95■□□□□ 0.14
SFTPBP07988 RBM17P1-201ENST00000453646 1190 ntBASIC15.95■□□□□ 0.14
SFTPBP07988 AC008040.2-201ENST00000461049 708 ntBASIC15.95■□□□□ 0.14
SFTPBP07988 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.95■□□□□ 0.14
SFTPBP07988 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.95■□□□□ 0.14
SFTPBP07988 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.95■□□□□ 0.14
SFTPBP07988 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SFTPBP07988 AP000525.1-201ENST00000608286 694 ntBASIC15.95■□□□□ 0.14
SFTPBP07988 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.95■□□□□ 0.14
SFTPBP07988 AL031985.4-201ENST00000642138 673 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms