Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1c1Q9Z1G3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1c1Q9Z1G3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1c1Q9Z1G3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1c1Q9Z1G3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1c1Q9Z1G3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1c1Q9Z1G3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1c1Q9Z1G3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c1Q9Z1G3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c1Q9Z1G3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c1Q9Z1G3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.16■■□□□ 1.14
Atp6v1c1Q9Z1G3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c1Q9Z1G3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c1Q9Z1G3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c1Q9Z1G3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Atp6v1c1Q9Z1G3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp6v1c1Q9Z1G3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Atp6v1c1Q9Z1G3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Atp6v1c1Q9Z1G3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp6v1c1Q9Z1G3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.15■■□□□ 1.14
Atp6v1c1Q9Z1G3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp6v1c1Q9Z1G3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Atp6v1c1Q9Z1G3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Atp6v1c1Q9Z1G3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.13■■□□□ 1.13
Atp6v1c1Q9Z1G3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Atp6v1c1Q9Z1G3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atp6v1c1Q9Z1G3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atp6v1c1Q9Z1G3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp6v1c1Q9Z1G3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Atp6v1c1Q9Z1G3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.12■■□□□ 1.13
Atp6v1c1Q9Z1G3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp6v1c1Q9Z1G3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp6v1c1Q9Z1G3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.12■■□□□ 1.13
Atp6v1c1Q9Z1G3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Atp6v1c1Q9Z1G3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atp6v1c1Q9Z1G3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atp6v1c1Q9Z1G3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atp6v1c1Q9Z1G3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atp6v1c1Q9Z1G3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atp6v1c1Q9Z1G3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atp6v1c1Q9Z1G3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Atp6v1c1Q9Z1G3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.1■■□□□ 1.13
Atp6v1c1Q9Z1G3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Atp6v1c1Q9Z1G3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
Atp6v1c1Q9Z1G3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp6v1c1Q9Z1G3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp6v1c1Q9Z1G3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp6v1c1Q9Z1G3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Atp6v1c1Q9Z1G3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Atp6v1c1Q9Z1G3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Atp6v1c1Q9Z1G3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1c1Q9Z1G3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1c1Q9Z1G3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1c1Q9Z1G3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.06■■□□□ 1.12
Atp6v1c1Q9Z1G3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atp6v1c1Q9Z1G3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atp6v1c1Q9Z1G3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1c1Q9Z1G3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1c1Q9Z1G3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1c1Q9Z1G3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1c1Q9Z1G3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1c1Q9Z1G3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1c1Q9Z1G3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Atp6v1c1Q9Z1G3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1c1Q9Z1G3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.04■■□□□ 1.12
Atp6v1c1Q9Z1G3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1c1Q9Z1G3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1c1Q9Z1G3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Atp6v1c1Q9Z1G3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
Atp6v1c1Q9Z1G3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1c1Q9Z1G3 Notumos-201ENSMUST00000151998 2659 ntBASIC22.03■■□□□ 1.12
Atp6v1c1Q9Z1G3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1c1Q9Z1G3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1c1Q9Z1G3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1c1Q9Z1G3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.03■■□□□ 1.12
Atp6v1c1Q9Z1G3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1c1Q9Z1G3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1c1Q9Z1G3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
Atp6v1c1Q9Z1G3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Atp6v1c1Q9Z1G3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.01■■□□□ 1.11
Atp6v1c1Q9Z1G3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atp6v1c1Q9Z1G3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1c1Q9Z1G3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1c1Q9Z1G3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1c1Q9Z1G3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1c1Q9Z1G3 Gm42699-201ENSMUST00000198104 1657 ntBASIC22■■□□□ 1.11
Atp6v1c1Q9Z1G3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1c1Q9Z1G3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Atp6v1c1Q9Z1G3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.99■■□□□ 1.11
Atp6v1c1Q9Z1G3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1c1Q9Z1G3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.99■■□□□ 1.11
Atp6v1c1Q9Z1G3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1c1Q9Z1G3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1c1Q9Z1G3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1c1Q9Z1G3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Atp6v1c1Q9Z1G3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.98■■□□□ 1.11
Atp6v1c1Q9Z1G3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Atp6v1c1Q9Z1G3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Atp6v1c1Q9Z1G3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Atp6v1c1Q9Z1G3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms