Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rrp8Q9DB85 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.51■■□□□ 1.19
Rrp8Q9DB85 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Rrp8Q9DB85 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rrp8Q9DB85 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.5■■□□□ 1.19
Rrp8Q9DB85 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Rrp8Q9DB85 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rrp8Q9DB85 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rrp8Q9DB85 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rrp8Q9DB85 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.49■■□□□ 1.19
Rrp8Q9DB85 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rrp8Q9DB85 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rrp8Q9DB85 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.48■■□□□ 1.19
Rrp8Q9DB85 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rrp8Q9DB85 Gm15546-201ENSMUST00000122095 826 ntBASIC22.47■■□□□ 1.19
Rrp8Q9DB85 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rrp8Q9DB85 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rrp8Q9DB85 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rrp8Q9DB85 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rrp8Q9DB85 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.46■■□□□ 1.19
Rrp8Q9DB85 Gm22567-201ENSMUST00000175542 342 ntBASIC22.46■■□□□ 1.19
Rrp8Q9DB85 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Rrp8Q9DB85 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rrp8Q9DB85 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rrp8Q9DB85 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rrp8Q9DB85 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rrp8Q9DB85 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rrp8Q9DB85 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.43■■□□□ 1.18
Rrp8Q9DB85 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.42■■□□□ 1.18
Rrp8Q9DB85 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rrp8Q9DB85 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Rrp8Q9DB85 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rrp8Q9DB85 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
Rrp8Q9DB85 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rrp8Q9DB85 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rrp8Q9DB85 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rrp8Q9DB85 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Rrp8Q9DB85 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.33■■□□□ 1.17
Rrp8Q9DB85 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rrp8Q9DB85 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.33■■□□□ 1.17
Rrp8Q9DB85 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rrp8Q9DB85 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rrp8Q9DB85 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rrp8Q9DB85 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rrp8Q9DB85 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rrp8Q9DB85 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rrp8Q9DB85 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.29■■□□□ 1.16
Rrp8Q9DB85 Gm15039-201ENSMUST00000118914 875 ntBASIC22.29■■□□□ 1.16
Rrp8Q9DB85 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rrp8Q9DB85 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Rrp8Q9DB85 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.29■■□□□ 1.16
Rrp8Q9DB85 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.28■■□□□ 1.16
Rrp8Q9DB85 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.27■■□□□ 1.16
Rrp8Q9DB85 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.27■■□□□ 1.16
Rrp8Q9DB85 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.27■■□□□ 1.16
Rrp8Q9DB85 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.27■■□□□ 1.16
Rrp8Q9DB85 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rrp8Q9DB85 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rrp8Q9DB85 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Rrp8Q9DB85 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.26■■□□□ 1.15
Rrp8Q9DB85 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Rrp8Q9DB85 Gm15820-201ENSMUST00000201566 728 ntBASIC22.26■■□□□ 1.15
Rrp8Q9DB85 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rrp8Q9DB85 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.25■■□□□ 1.15
Rrp8Q9DB85 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms